Protein–RNA interactions for Protein: P28072

PSMB6, Proteasome subunit beta type-6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6P28072 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB6P28072 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PSMB6P28072 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMB6P28072 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
PSMB6P28072 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.66■□□□□ 0.58
PSMB6P28072 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMB6P28072 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB6P28072 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB6P28072 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB6P28072 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PSMB6P28072 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB6P28072 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.65■□□□□ 0.58
PSMB6P28072 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB6P28072 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PSMB6P28072 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMB6P28072 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB6P28072 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.64■□□□□ 0.58
PSMB6P28072 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB6P28072 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB6P28072 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB6P28072 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PSMB6P28072 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB6P28072 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.64■□□□□ 0.57
PSMB6P28072 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.64■□□□□ 0.57
PSMB6P28072 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB6P28072 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB6P28072 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB6P28072 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.64■□□□□ 0.57
PSMB6P28072 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSMB6P28072 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PSMB6P28072 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMB6P28072 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSMB6P28072 AL592293.1-201ENST00000502889 1188 ntBASIC18.63■□□□□ 0.57
PSMB6P28072 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PSMB6P28072 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMB6P28072 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSMB6P28072 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMB6P28072 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PSMB6P28072 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMB6P28072 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
PSMB6P28072 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMB6P28072 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PSMB6P28072 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMB6P28072 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
PSMB6P28072 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMB6P28072 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
PSMB6P28072 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMB6P28072 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMB6P28072 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.61■□□□□ 0.57
PSMB6P28072 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PSMB6P28072 AC018755.3-202ENST00000596210 929 ntBASIC18.61■□□□□ 0.57
PSMB6P28072 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.61■□□□□ 0.57
PSMB6P28072 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMB6P28072 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMB6P28072 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMB6P28072 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.6■□□□□ 0.57
PSMB6P28072 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMB6P28072 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMB6P28072 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PSMB6P28072 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PSMB6P28072 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMB6P28072 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMB6P28072 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMB6P28072 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMB6P28072 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMB6P28072 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMB6P28072 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PSMB6P28072 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMB6P28072 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMB6P28072 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PSMB6P28072 C11orf96-202ENST00000528572 1834 ntBASIC18.59■□□□□ 0.57
PSMB6P28072 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.59■□□□□ 0.57
PSMB6P28072 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMB6P28072 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMB6P28072 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMB6P28072 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms