Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO1P25800 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO1P25800 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO1P25800 AC079630.1-202ENST00000618127 1840 ntBASIC18.84■□□□□ 0.61
LMO1P25800 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO1P25800 AC005703.6-201ENST00000623265 1329 ntBASIC18.84■□□□□ 0.61
LMO1P25800 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.84■□□□□ 0.61
LMO1P25800 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LMO1P25800 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
LMO1P25800 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO1P25800 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO1P25800 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.84■□□□□ 0.61
LMO1P25800 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.83■□□□□ 0.61
LMO1P25800 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO1P25800 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LMO1P25800 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO1P25800 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.83■□□□□ 0.6
LMO1P25800 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LMO1P25800 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.83■□□□□ 0.6
LMO1P25800 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LMO1P25800 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LMO1P25800 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LMO1P25800 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 LINC00565-201ENST00000562710 2331 ntBASIC18.82■□□□□ 0.6
LMO1P25800 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.82■□□□□ 0.6
LMO1P25800 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LMO1P25800 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.82■□□□□ 0.6
LMO1P25800 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.82■□□□□ 0.6
LMO1P25800 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.82■□□□□ 0.6
LMO1P25800 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.82■□□□□ 0.6
LMO1P25800 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMO1P25800 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO1P25800 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.81■□□□□ 0.6
LMO1P25800 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO1P25800 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.81■□□□□ 0.6
LMO1P25800 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMO1P25800 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LMO1P25800 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LMO1P25800 AL024507.2-201ENST00000606070 2574 ntBASIC18.81■□□□□ 0.6
LMO1P25800 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.81■□□□□ 0.6
LMO1P25800 AC009299.2-201ENST00000482477 511 ntBASIC18.81■□□□□ 0.6
LMO1P25800 MIR4787-201ENST00000607364 84 ntBASIC18.81■□□□□ 0.6
LMO1P25800 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMO1P25800 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMO1P25800 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.8■□□□□ 0.6
LMO1P25800 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
LMO1P25800 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LMO1P25800 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.8■□□□□ 0.6
LMO1P25800 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LMO1P25800 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.8■□□□□ 0.6
LMO1P25800 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.8■□□□□ 0.6
LMO1P25800 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO1P25800 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LMO1P25800 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LMO1P25800 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.79■□□□□ 0.6
LMO1P25800 AC239859.2-201ENST00000444165 318 ntBASIC18.79■□□□□ 0.6
LMO1P25800 AL451085.2-201ENST00000605085 799 ntBASIC18.79■□□□□ 0.6
LMO1P25800 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.79■□□□□ 0.6
LMO1P25800 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO1P25800 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
LMO1P25800 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.78■□□□□ 0.6
LMO1P25800 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LMO1P25800 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LMO1P25800 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.78■□□□□ 0.6
LMO1P25800 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.78■□□□□ 0.6
LMO1P25800 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO1P25800 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms