Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.94■□□□□ 0.62
COL8A2P25067 pRNA.6-201ENST00000610482 90 ntBASIC18.94■□□□□ 0.62
COL8A2P25067 pRNA.5-201ENST00000612139 90 ntBASIC18.94■□□□□ 0.62
COL8A2P25067 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.94■□□□□ 0.62
COL8A2P25067 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.94■□□□□ 0.62
COL8A2P25067 pRNA.11-201ENST00000618423 90 ntBASIC18.94■□□□□ 0.62
COL8A2P25067 pRNA.13-201ENST00000619112 90 ntBASIC18.94■□□□□ 0.62
COL8A2P25067 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.94■□□□□ 0.62
COL8A2P25067 AC004812.2-201ENST00000611079 2094 ntBASIC18.94■□□□□ 0.62
COL8A2P25067 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL8A2P25067 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL8A2P25067 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL8A2P25067 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL8A2P25067 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 AP001330.3-201ENST00000520123 633 ntBASIC18.93■□□□□ 0.62
COL8A2P25067 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.93■□□□□ 0.62
COL8A2P25067 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.93■□□□□ 0.62
COL8A2P25067 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.93■□□□□ 0.62
COL8A2P25067 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL8A2P25067 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL8A2P25067 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL8A2P25067 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.92■□□□□ 0.62
COL8A2P25067 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL8A2P25067 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL8A2P25067 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.92■□□□□ 0.62
COL8A2P25067 MIR939-201ENST00000401314 82 ntBASIC18.92■□□□□ 0.62
COL8A2P25067 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL8A2P25067 AC008764.7-201ENST00000593779 1081 ntBASIC18.92■□□□□ 0.62
COL8A2P25067 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL8A2P25067 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
COL8A2P25067 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL8A2P25067 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL8A2P25067 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL8A2P25067 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL8A2P25067 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.91■□□□□ 0.62
COL8A2P25067 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.91■□□□□ 0.62
COL8A2P25067 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
COL8A2P25067 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.91■□□□□ 0.62
COL8A2P25067 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.91■□□□□ 0.62
COL8A2P25067 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.91■□□□□ 0.62
COL8A2P25067 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.91■□□□□ 0.62
COL8A2P25067 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.91■□□□□ 0.62
COL8A2P25067 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL8A2P25067 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.91■□□□□ 0.62
COL8A2P25067 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.9■□□□□ 0.62
COL8A2P25067 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 AC136469.2-201ENST00000623944 1028 ntBASIC18.9■□□□□ 0.62
COL8A2P25067 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.9■□□□□ 0.62
COL8A2P25067 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL8A2P25067 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 AC105265.2-201ENST00000467189 838 ntBASIC18.89■□□□□ 0.61
COL8A2P25067 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.89■□□□□ 0.61
COL8A2P25067 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.89■□□□□ 0.61
COL8A2P25067 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL8A2P25067 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
COL8A2P25067 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.88■□□□□ 0.61
COL8A2P25067 AC091305.1-201ENST00000479476 895 ntBASIC18.88■□□□□ 0.61
COL8A2P25067 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL8A2P25067 CA15P2-201ENST00000611168 834 ntBASIC18.88■□□□□ 0.61
COL8A2P25067 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL8A2P25067 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL8A2P25067 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL8A2P25067 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
COL8A2P25067 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.87■□□□□ 0.61
COL8A2P25067 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL8A2P25067 RASA4CP-201ENST00000424092 1398 ntBASIC18.87■□□□□ 0.61
COL8A2P25067 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.87■□□□□ 0.61
COL8A2P25067 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms