Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.9■□□□□ 0.78
CTLA4P16410 AC092028.1-203ENST00000608262 953 ntBASIC19.9■□□□□ 0.78
CTLA4P16410 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.9■□□□□ 0.78
CTLA4P16410 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.9■□□□□ 0.78
CTLA4P16410 AC005703.6-201ENST00000623265 1329 ntBASIC19.9■□□□□ 0.78
CTLA4P16410 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
CTLA4P16410 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 AC233723.2-201ENST00000623798 2106 ntBASIC19.9■□□□□ 0.78
CTLA4P16410 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTLA4P16410 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTLA4P16410 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTLA4P16410 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.89■□□□□ 0.77
CTLA4P16410 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CTLA4P16410 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CTLA4P16410 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.89■□□□□ 0.77
CTLA4P16410 KRT125P-201ENST00000546827 989 ntBASIC19.89■□□□□ 0.77
CTLA4P16410 Z92544.1-202ENST00000571933 1220 ntBASIC19.89■□□□□ 0.77
CTLA4P16410 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTLA4P16410 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTLA4P16410 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CTLA4P16410 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.88■□□□□ 0.77
CTLA4P16410 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTLA4P16410 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.88■□□□□ 0.77
CTLA4P16410 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.88■□□□□ 0.77
CTLA4P16410 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.88■□□□□ 0.77
CTLA4P16410 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.88■□□□□ 0.77
CTLA4P16410 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CTLA4P16410 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTLA4P16410 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTLA4P16410 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
CTLA4P16410 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.87■□□□□ 0.77
CTLA4P16410 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTLA4P16410 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.87■□□□□ 0.77
CTLA4P16410 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.87■□□□□ 0.77
CTLA4P16410 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTLA4P16410 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTLA4P16410 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.86■□□□□ 0.77
CTLA4P16410 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTLA4P16410 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTLA4P16410 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTLA4P16410 AC009299.2-201ENST00000482477 511 ntBASIC19.86■□□□□ 0.77
CTLA4P16410 MIR4787-201ENST00000607364 84 ntBASIC19.86■□□□□ 0.77
CTLA4P16410 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.86■□□□□ 0.77
CTLA4P16410 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTLA4P16410 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTLA4P16410 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTLA4P16410 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTLA4P16410 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTLA4P16410 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTLA4P16410 AC144652.1-201ENST00000609974 1624 ntBASIC19.85■□□□□ 0.77
CTLA4P16410 AC239859.2-201ENST00000444165 318 ntBASIC19.85■□□□□ 0.77
CTLA4P16410 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CTLA4P16410 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.85■□□□□ 0.77
CTLA4P16410 AL451085.2-201ENST00000605085 799 ntBASIC19.85■□□□□ 0.77
CTLA4P16410 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTLA4P16410 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTLA4P16410 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.85■□□□□ 0.77
CTLA4P16410 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.84■□□□□ 0.77
CTLA4P16410 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTLA4P16410 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.84■□□□□ 0.77
CTLA4P16410 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CTLA4P16410 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTLA4P16410 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.84■□□□□ 0.77
CTLA4P16410 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTLA4P16410 AL117328.2-201ENST00000624617 1940 ntBASIC19.84■□□□□ 0.77
CTLA4P16410 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTLA4P16410 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTLA4P16410 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTLA4P16410 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTLA4P16410 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
CTLA4P16410 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.83■□□□□ 0.77
CTLA4P16410 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTLA4P16410 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTLA4P16410 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CTLA4P16410 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTLA4P16410 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.83■□□□□ 0.76
CTLA4P16410 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.83■□□□□ 0.76
CTLA4P16410 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTLA4P16410 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTLA4P16410 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CTLA4P16410 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTLA4P16410 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTLA4P16410 MTDHP2-201ENST00000601468 714 ntBASIC19.82■□□□□ 0.76
CTLA4P16410 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTLA4P16410 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.82■□□□□ 0.76
CTLA4P16410 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTLA4P16410 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
CTLA4P16410 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTLA4P16410 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
CTLA4P16410 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms