Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPARCP09486 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.89■□□□□ 0.77
SPARCP09486 AC079834.2-201ENST00000609776 1949 ntBASIC19.89■□□□□ 0.77
SPARCP09486 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPARCP09486 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPARCP09486 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.88■□□□□ 0.77
SPARCP09486 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.88■□□□□ 0.77
SPARCP09486 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPARCP09486 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SPARCP09486 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SPARCP09486 AL117328.2-201ENST00000624617 1940 ntBASIC19.87■□□□□ 0.77
SPARCP09486 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.87■□□□□ 0.77
SPARCP09486 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
SPARCP09486 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.87■□□□□ 0.77
SPARCP09486 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPARCP09486 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.87■□□□□ 0.77
SPARCP09486 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPARCP09486 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPARCP09486 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.86■□□□□ 0.77
SPARCP09486 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SPARCP09486 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPARCP09486 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SPARCP09486 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SPARCP09486 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPARCP09486 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.86■□□□□ 0.77
SPARCP09486 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPARCP09486 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.85■□□□□ 0.77
SPARCP09486 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.85■□□□□ 0.77
SPARCP09486 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.85■□□□□ 0.77
SPARCP09486 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.85■□□□□ 0.77
SPARCP09486 AL031848.2-201ENST00000607670 837 ntBASIC19.85■□□□□ 0.77
SPARCP09486 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.85■□□□□ 0.77
SPARCP09486 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.85■□□□□ 0.77
SPARCP09486 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SPARCP09486 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SPARCP09486 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPARCP09486 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SPARCP09486 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.84■□□□□ 0.77
SPARCP09486 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SPARCP09486 SNX5-217ENST00000606557 1087 ntBASIC19.84■□□□□ 0.77
SPARCP09486 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPARCP09486 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SPARCP09486 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.83■□□□□ 0.77
SPARCP09486 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.83■□□□□ 0.77
SPARCP09486 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPARCP09486 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPARCP09486 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPARCP09486 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SPARCP09486 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPARCP09486 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPARCP09486 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.83■□□□□ 0.77
SPARCP09486 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.83■□□□□ 0.77
SPARCP09486 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.83■□□□□ 0.77
SPARCP09486 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.83■□□□□ 0.77
SPARCP09486 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPARCP09486 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPARCP09486 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.83■□□□□ 0.76
SPARCP09486 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPARCP09486 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.83■□□□□ 0.76
SPARCP09486 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPARCP09486 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.83■□□□□ 0.76
SPARCP09486 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPARCP09486 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.82■□□□□ 0.76
SPARCP09486 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPARCP09486 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPARCP09486 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.82■□□□□ 0.76
SPARCP09486 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SPARCP09486 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SPARCP09486 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPARCP09486 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPARCP09486 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
SPARCP09486 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.81■□□□□ 0.76
SPARCP09486 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms