Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
APPP05067 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
APPP05067 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.88
APPP05067 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
APPP05067 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
APPP05067 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
APPP05067 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.83■■□□□ 1.88
APPP05067 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
APPP05067 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
APPP05067 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
APPP05067 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
APPP05067 AC009086.3-201ENST00000623486 1008 ntBASIC26.82■■□□□ 1.88
APPP05067 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.82■■□□□ 1.88
APPP05067 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
APPP05067 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.82■■□□□ 1.88
APPP05067 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.81■■□□□ 1.88
APPP05067 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.81■■□□□ 1.88
APPP05067 SYT6-210ENST00000641643 1587 ntBASIC26.81■■□□□ 1.88
APPP05067 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.81■■□□□ 1.88
APPP05067 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 AC006455.2-201ENST00000429931 906 ntBASIC26.81■■□□□ 1.88
APPP05067 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
APPP05067 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.81■■□□□ 1.88
APPP05067 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
APPP05067 AC144652.1-201ENST00000609974 1624 ntBASIC26.8■■□□□ 1.88
APPP05067 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
APPP05067 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
APPP05067 DUX4L19-201ENST00000557448 1267 ntBASIC26.8■■□□□ 1.88
APPP05067 AC110285.6-201ENST00000617652 491 ntBASIC26.8■■□□□ 1.88
APPP05067 AC079630.1-202ENST00000618127 1840 ntBASIC26.8■■□□□ 1.88
APPP05067 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
APPP05067 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
APPP05067 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
APPP05067 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC26.79■■□□□ 1.88
APPP05067 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.79■■□□□ 1.88
APPP05067 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 AL139246.5-201ENST00000606645 996 ntBASIC26.79■■□□□ 1.88
APPP05067 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
APPP05067 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
APPP05067 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
APPP05067 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
APPP05067 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
APPP05067 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.78■■□□□ 1.88
APPP05067 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.78■■□□□ 1.88
APPP05067 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
APPP05067 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.77■■□□□ 1.88
APPP05067 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.77■■□□□ 1.88
APPP05067 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.77■■□□□ 1.88
APPP05067 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.77■■□□□ 1.88
APPP05067 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.77■■□□□ 1.88
APPP05067 PBX2P1-201ENST00000493219 1291 ntBASIC26.77■■□□□ 1.88
APPP05067 AL136162.1-201ENST00000607711 1078 ntBASIC26.77■■□□□ 1.88
APPP05067 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
APPP05067 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.77■■□□□ 1.88
APPP05067 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
APPP05067 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
APPP05067 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.76■■□□□ 1.88
APPP05067 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
APPP05067 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.76■■□□□ 1.87
APPP05067 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
APPP05067 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
APPP05067 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
APPP05067 FP325331.1-202ENST00000623531 1380 ntBASIC26.75■■□□□ 1.87
APPP05067 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
APPP05067 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
APPP05067 SERBP1P1-201ENST00000396021 1160 ntBASIC26.75■■□□□ 1.87
APPP05067 LINC01529-204ENST00000636474 1715 ntBASIC26.75■■□□□ 1.87
APPP05067 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
APPP05067 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
APPP05067 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.74■■□□□ 1.87
APPP05067 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
APPP05067 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
APPP05067 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.74■■□□□ 1.87
APPP05067 ANOS2P-203ENST00000472227 1816 ntBASIC26.74■■□□□ 1.87
APPP05067 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.73■■□□□ 1.87
APPP05067 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.73■■□□□ 1.87
APPP05067 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
APPP05067 AC135279.3-201ENST00000610945 1311 ntBASIC26.72■■□□□ 1.87
APPP05067 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms