Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.71■□□□□ 0.43
IFNA1P01562 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.71■□□□□ 0.43
IFNA1P01562 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.71■□□□□ 0.43
IFNA1P01562 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IFNA1P01562 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.71■□□□□ 0.43
IFNA1P01562 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IFNA1P01562 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.71■□□□□ 0.43
IFNA1P01562 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IFNA1P01562 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
IFNA1P01562 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IFNA1P01562 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
IFNA1P01562 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IFNA1P01562 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
IFNA1P01562 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFNA1P01562 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.7■□□□□ 0.42
IFNA1P01562 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.7■□□□□ 0.42
IFNA1P01562 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IFNA1P01562 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFNA1P01562 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFNA1P01562 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.69■□□□□ 0.42
IFNA1P01562 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.69■□□□□ 0.42
IFNA1P01562 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IFNA1P01562 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.69■□□□□ 0.42
IFNA1P01562 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 AL161729.1-201ENST00000604104 1402 ntBASIC17.69■□□□□ 0.42
IFNA1P01562 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
IFNA1P01562 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNA1P01562 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.68■□□□□ 0.42
IFNA1P01562 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNA1P01562 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNA1P01562 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNA1P01562 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNA1P01562 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNA1P01562 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNA1P01562 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
IFNA1P01562 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.67■□□□□ 0.42
IFNA1P01562 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
IFNA1P01562 AL121603.2-201ENST00000557373 2117 ntBASIC17.67■□□□□ 0.42
IFNA1P01562 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.67■□□□□ 0.42
IFNA1P01562 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
IFNA1P01562 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNA1P01562 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
IFNA1P01562 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFNA1P01562 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IFNA1P01562 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.66■□□□□ 0.42
IFNA1P01562 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
IFNA1P01562 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
IFNA1P01562 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFNA1P01562 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
IFNA1P01562 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.66■□□□□ 0.42
IFNA1P01562 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
IFNA1P01562 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IFNA1P01562 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IFNA1P01562 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFNA1P01562 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms