Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D4O60343 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D4O60343 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 DUX4L4-201ENST00000566884 1269 ntBASIC23.81■■□□□ 1.4
TBC1D4O60343 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.81■■□□□ 1.4
TBC1D4O60343 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D4O60343 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TBC1D4O60343 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D4O60343 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
TBC1D4O60343 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D4O60343 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D4O60343 LINC00543-201ENST00000567234 1845 ntBASIC23.8■■□□□ 1.4
TBC1D4O60343 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D4O60343 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D4O60343 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.8■■□□□ 1.4
TBC1D4O60343 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.8■■□□□ 1.4
TBC1D4O60343 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D4O60343 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.8■■□□□ 1.4
TBC1D4O60343 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.8■■□□□ 1.4
TBC1D4O60343 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D4O60343 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TBC1D4O60343 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D4O60343 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.79■■□□□ 1.4
TBC1D4O60343 AC097381.1-201ENST00000429019 1296 ntBASIC23.79■■□□□ 1.4
TBC1D4O60343 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 SLC47A1P1-202ENST00000449666 945 ntBASIC23.79■■□□□ 1.4
TBC1D4O60343 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D4O60343 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.79■■□□□ 1.4
TBC1D4O60343 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D4O60343 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TBC1D4O60343 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TBC1D4O60343 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TBC1D4O60343 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.78■■□□□ 1.4
TBC1D4O60343 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 AC133637.1-201ENST00000624115 1537 ntBASIC23.78■■□□□ 1.4
TBC1D4O60343 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D4O60343 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.77■■□□□ 1.4
TBC1D4O60343 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.77■■□□□ 1.4
TBC1D4O60343 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.77■■□□□ 1.4
TBC1D4O60343 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D4O60343 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TBC1D4O60343 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TBC1D4O60343 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TBC1D4O60343 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TBC1D4O60343 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.76■■□□□ 1.39
TBC1D4O60343 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.76■■□□□ 1.39
TBC1D4O60343 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D4O60343 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D4O60343 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D4O60343 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D4O60343 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D4O60343 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.75■■□□□ 1.39
TBC1D4O60343 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.75■■□□□ 1.39
TBC1D4O60343 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.75■■□□□ 1.39
TBC1D4O60343 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 AC144652.1-201ENST00000609974 1624 ntBASIC23.75■■□□□ 1.39
TBC1D4O60343 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TBC1D4O60343 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.75■■□□□ 1.39
TBC1D4O60343 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.75■■□□□ 1.39
TBC1D4O60343 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D4O60343 AL139125.2-201ENST00000623134 1869 ntBASIC23.75■■□□□ 1.39
TBC1D4O60343 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
TBC1D4O60343 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.74■■□□□ 1.39
TBC1D4O60343 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.74■■□□□ 1.39
TBC1D4O60343 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.74■■□□□ 1.39
TBC1D4O60343 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.74■■□□□ 1.39
TBC1D4O60343 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D4O60343 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TBC1D4O60343 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D4O60343 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms