Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 AC026185.1-201ENST00000445748 174 ntBASIC21.94■■□□□ 1.1
CDX4O14627 AC137761.2-201ENST00000561729 223 ntBASIC21.94■■□□□ 1.1
CDX4O14627 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.94■■□□□ 1.1
CDX4O14627 AC145350.3-201ENST00000569033 163 ntBASIC21.94■■□□□ 1.1
CDX4O14627 AL499627.2-201ENST00000606283 725 ntBASIC21.94■■□□□ 1.1
CDX4O14627 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CDX4O14627 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.94■■□□□ 1.1
CDX4O14627 AL161729.1-201ENST00000604104 1402 ntBASIC21.94■■□□□ 1.1
CDX4O14627 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX4O14627 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.94■■□□□ 1.1
CDX4O14627 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CDX4O14627 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX4O14627 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDX4O14627 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX4O14627 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CDX4O14627 OR2I1P-207ENST00000453522 948 ntBASIC21.93■■□□□ 1.1
CDX4O14627 AP005435.1-201ENST00000529293 1178 ntBASIC21.93■■□□□ 1.1
CDX4O14627 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.93■■□□□ 1.1
CDX4O14627 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.93■■□□□ 1.1
CDX4O14627 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDX4O14627 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.93■■□□□ 1.1
CDX4O14627 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.93■■□□□ 1.1
CDX4O14627 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.93■■□□□ 1.1
CDX4O14627 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX4O14627 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX4O14627 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX4O14627 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.92■■□□□ 1.1
CDX4O14627 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.92■■□□□ 1.1
CDX4O14627 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.92■■□□□ 1.1
CDX4O14627 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.92■■□□□ 1.1
CDX4O14627 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX4O14627 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.92■■□□□ 1.1
CDX4O14627 AC105233.4-201ENST00000642045 216 ntBASIC21.92■■□□□ 1.1
CDX4O14627 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX4O14627 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDX4O14627 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.91■■□□□ 1.1
CDX4O14627 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX4O14627 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.91■■□□□ 1.1
CDX4O14627 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX4O14627 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDX4O14627 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDX4O14627 ALDH1A3-203ENST00000557963 1670 ntBASIC21.91■■□□□ 1.1
CDX4O14627 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX4O14627 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CDX4O14627 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.9■■□□□ 1.1
CDX4O14627 TMEM191A-211ENST00000637163 1067 ntBASIC21.9■■□□□ 1.1
CDX4O14627 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX4O14627 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.9■■□□□ 1.1
CDX4O14627 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX4O14627 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.9■■□□□ 1.1
CDX4O14627 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.89■■□□□ 1.1
CDX4O14627 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.89■■□□□ 1.09
CDX4O14627 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.89■■□□□ 1.09
CDX4O14627 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.89■■□□□ 1.09
CDX4O14627 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.89■■□□□ 1.09
CDX4O14627 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.89■■□□□ 1.09
CDX4O14627 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDX4O14627 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDX4O14627 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDX4O14627 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDX4O14627 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.88■■□□□ 1.09
CDX4O14627 AL355802.2-201ENST00000402069 882 ntBASIC21.88■■□□□ 1.09
CDX4O14627 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.88■■□□□ 1.09
CDX4O14627 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.88■■□□□ 1.09
CDX4O14627 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.88■■□□□ 1.09
CDX4O14627 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.88■■□□□ 1.09
CDX4O14627 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDX4O14627 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CDX4O14627 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDX4O14627 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDX4O14627 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDX4O14627 CROCCP5-201ENST00000436658 830 ntBASIC21.87■■□□□ 1.09
CDX4O14627 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.87■■□□□ 1.09
CDX4O14627 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.87■■□□□ 1.09
CDX4O14627 AL109923.1-201ENST00000618799 583 ntBASIC21.87■■□□□ 1.09
CDX4O14627 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CDX4O14627 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDX4O14627 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDX4O14627 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDX4O14627 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.86■■□□□ 1.09
CDX4O14627 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDX4O14627 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms