Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NKX2-6A6NCS4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 TSPY26P-201ENST00000476365 1326 ntBASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 AC034268.1-201ENST00000441047 882 ntBASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
NKX2-6A6NCS4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 AC138932.3-201ENST00000567634 1902 ntBASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 AC022211.4-201ENST00000625094 2161 ntBASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 AL031602.1-201ENST00000633169 911 ntBASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-6A6NCS4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 SLC47A1P1-202ENST00000449666 945 ntBASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 AL139125.2-201ENST00000623134 1869 ntBASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-6A6NCS4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NKX2-6A6NCS4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 YBX1P1-201ENST00000445822 960 ntBASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 AC090192.1-201ENST00000517740 490 ntBASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 AC022517.1-201ENST00000592429 346 ntBASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.83■□□□□ 0.77
NKX2-6A6NCS4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.83■□□□□ 0.76
NKX2-6A6NCS4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 KRT18P5-201ENST00000436075 1291 ntBASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 RARRES2P11-201ENST00000635158 484 ntBASIC19.82■□□□□ 0.76
NKX2-6A6NCS4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms