Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AC079630.1-202ENST00000618127 1840 ntBASIC20.39■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 AL139246.5-201ENST00000606645 996 ntBASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 AC144652.1-201ENST00000609974 1624 ntBASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 MIR638-201ENST00000385237 100 ntBASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 C17orf82-201ENST00000623772 1530 ntBASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 DUSP8P5-201ENST00000422884 1815 ntBASIC20.34■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 AC110285.6-201ENST00000617652 491 ntBASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF12-TNFSF13A0A0A6YY99 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FP325331.1-202ENST00000623531 1380 ntBASIC20.33■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 AC096631.2-201ENST00000436136 790 ntBASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF12-TNFSF13A0A0A6YY99 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms