Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB1Q9Y5G3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB1Q9Y5G3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGB1Q9Y5G3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGB1Q9Y5G3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGB1Q9Y5G3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDHGB1Q9Y5G3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHGB1Q9Y5G3 ABCB10P1-201ENST00000614297 2181 ntBASIC25.42■■□□□ 1.66
PCDHGB1Q9Y5G3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGB1Q9Y5G3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDHGB1Q9Y5G3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
PCDHGB1Q9Y5G3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHGB1Q9Y5G3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGB1Q9Y5G3 ABCB10P3-201ENST00000561950 2166 ntBASIC25.38■■□□□ 1.65
PCDHGB1Q9Y5G3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGB1Q9Y5G3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGB1Q9Y5G3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB1Q9Y5G3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB1Q9Y5G3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB1Q9Y5G3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB1Q9Y5G3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHGB1Q9Y5G3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGB1Q9Y5G3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGB1Q9Y5G3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGB1Q9Y5G3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGB1Q9Y5G3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB1Q9Y5G3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB1Q9Y5G3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB1Q9Y5G3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB1Q9Y5G3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHGB1Q9Y5G3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
PCDHGB1Q9Y5G3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGB1Q9Y5G3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGB1Q9Y5G3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGB1Q9Y5G3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGB1Q9Y5G3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGB1Q9Y5G3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGB1Q9Y5G3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDHGB1Q9Y5G3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGB1Q9Y5G3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGB1Q9Y5G3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGB1Q9Y5G3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGB1Q9Y5G3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
PCDHGB1Q9Y5G3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGB1Q9Y5G3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGB1Q9Y5G3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHGB1Q9Y5G3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHGB1Q9Y5G3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGB1Q9Y5G3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHGB1Q9Y5G3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB1Q9Y5G3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGB1Q9Y5G3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGB1Q9Y5G3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGB1Q9Y5G3 AC015813.7-201ENST00000623294 581 ntBASIC25.14■■□□□ 1.62
PCDHGB1Q9Y5G3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PCDHGB1Q9Y5G3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PCDHGB1Q9Y5G3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGB1Q9Y5G3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHGB1Q9Y5G3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGB1Q9Y5G3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
PCDHGB1Q9Y5G3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PCDHGB1Q9Y5G3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHGB1Q9Y5G3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGB1Q9Y5G3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
PCDHGB1Q9Y5G3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB1Q9Y5G3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB1Q9Y5G3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB1Q9Y5G3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB1Q9Y5G3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB1Q9Y5G3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHGB1Q9Y5G3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHGB1Q9Y5G3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB1Q9Y5G3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB1Q9Y5G3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
PCDHGB1Q9Y5G3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB1Q9Y5G3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB1Q9Y5G3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGB1Q9Y5G3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB1Q9Y5G3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB1Q9Y5G3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB1Q9Y5G3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHGB1Q9Y5G3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHGB1Q9Y5G3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGB1Q9Y5G3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB1Q9Y5G3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB1Q9Y5G3 AC120057.4-201ENST00000624722 1615 ntBASIC24.95■■□□□ 1.58
PCDHGB1Q9Y5G3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
PCDHGB1Q9Y5G3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB1Q9Y5G3 AC139426.1-201ENST00000568218 2529 ntBASIC24.92■■□□□ 1.58
PCDHGB1Q9Y5G3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGB1Q9Y5G3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGB1Q9Y5G3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB1Q9Y5G3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB1Q9Y5G3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB1Q9Y5G3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB1Q9Y5G3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB1Q9Y5G3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB1Q9Y5G3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PCDHGB1Q9Y5G3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
PCDHGB1Q9Y5G3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms