Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PCDHGB6Q9Y5F9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26■■□□□ 1.75
PCDHGB6Q9Y5F9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHGB6Q9Y5F9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PCDHGB6Q9Y5F9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHGB6Q9Y5F9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHGB6Q9Y5F9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGB6Q9Y5F9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGB6Q9Y5F9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PCDHGB6Q9Y5F9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGB6Q9Y5F9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGB6Q9Y5F9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
PCDHGB6Q9Y5F9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHGB6Q9Y5F9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
PCDHGB6Q9Y5F9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGB6Q9Y5F9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.92■■□□□ 1.74
PCDHGB6Q9Y5F9 SETD8P1-201ENST00000623146 1180 ntBASIC25.91■■□□□ 1.74
PCDHGB6Q9Y5F9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGB6Q9Y5F9 AC097358.2-201ENST00000607541 1159 ntBASIC25.89■■□□□ 1.74
PCDHGB6Q9Y5F9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHGB6Q9Y5F9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGB6Q9Y5F9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHGB6Q9Y5F9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDHGB6Q9Y5F9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB6Q9Y5F9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCDHGB6Q9Y5F9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGB6Q9Y5F9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGB6Q9Y5F9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDHGB6Q9Y5F9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHGB6Q9Y5F9 AC136428.2-201ENST00000563187 214 ntBASIC25.83■■□□□ 1.73
PCDHGB6Q9Y5F9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGB6Q9Y5F9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB6Q9Y5F9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB6Q9Y5F9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGB6Q9Y5F9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHGB6Q9Y5F9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGB6Q9Y5F9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHGB6Q9Y5F9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHGB6Q9Y5F9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGB6Q9Y5F9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PCDHGB6Q9Y5F9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGB6Q9Y5F9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHGB6Q9Y5F9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB6Q9Y5F9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGB6Q9Y5F9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGB6Q9Y5F9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGB6Q9Y5F9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGB6Q9Y5F9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHGB6Q9Y5F9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB6Q9Y5F9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB6Q9Y5F9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.68■■□□□ 1.7
PCDHGB6Q9Y5F9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHGB6Q9Y5F9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGB6Q9Y5F9 SUZ12P1-203ENST00000578195 985 ntBASIC25.67■■□□□ 1.7
PCDHGB6Q9Y5F9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDHGB6Q9Y5F9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB6Q9Y5F9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGB6Q9Y5F9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB6Q9Y5F9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGB6Q9Y5F9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGB6Q9Y5F9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDHGB6Q9Y5F9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB6Q9Y5F9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.62■■□□□ 1.69
PCDHGB6Q9Y5F9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB6Q9Y5F9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB6Q9Y5F9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB6Q9Y5F9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB6Q9Y5F9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
PCDHGB6Q9Y5F9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHGB6Q9Y5F9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGB6Q9Y5F9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB6Q9Y5F9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB6Q9Y5F9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB6Q9Y5F9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB6Q9Y5F9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDHGB6Q9Y5F9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGB6Q9Y5F9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
PCDHGB6Q9Y5F9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGB6Q9Y5F9 AL133380.1-201ENST00000506013 324 ntBASIC25.53■■□□□ 1.68
PCDHGB6Q9Y5F9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGB6Q9Y5F9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGB6Q9Y5F9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PCDHGB6Q9Y5F9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHGB6Q9Y5F9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGB6Q9Y5F9 CAHM-201ENST00000604200 896 ntBASIC25.51■■□□□ 1.67
PCDHGB6Q9Y5F9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGB6Q9Y5F9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGB6Q9Y5F9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGB6Q9Y5F9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PCDHGB6Q9Y5F9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHGB6Q9Y5F9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHGB6Q9Y5F9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGB6Q9Y5F9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHGB6Q9Y5F9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGB6Q9Y5F9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB6Q9Y5F9 AL391121.1-201ENST00000607967 1349 ntBASIC25.45■■□□□ 1.66
PCDHGB6Q9Y5F9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB6Q9Y5F9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PCDHGB6Q9Y5F9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHGB6Q9Y5F9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms