Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TTC13Q8NBP0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC13Q8NBP0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC13Q8NBP0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
TTC13Q8NBP0 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.75■■■□□ 2.19
TTC13Q8NBP0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
TTC13Q8NBP0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.73■■■□□ 2.19
TTC13Q8NBP0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TTC13Q8NBP0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.72■■■□□ 2.19
TTC13Q8NBP0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
TTC13Q8NBP0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
TTC13Q8NBP0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
TTC13Q8NBP0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.72■■■□□ 2.19
TTC13Q8NBP0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TTC13Q8NBP0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.71■■■□□ 2.19
TTC13Q8NBP0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
TTC13Q8NBP0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC13Q8NBP0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.69■■■□□ 2.18
TTC13Q8NBP0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
TTC13Q8NBP0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.68■■■□□ 2.18
TTC13Q8NBP0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TTC13Q8NBP0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC13Q8NBP0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC13Q8NBP0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TTC13Q8NBP0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.64■■■□□ 2.18
TTC13Q8NBP0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC13Q8NBP0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC13Q8NBP0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC13Q8NBP0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.61■■■□□ 2.17
TTC13Q8NBP0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC13Q8NBP0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.57■■■□□ 2.16
TTC13Q8NBP0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TTC13Q8NBP0 AC120057.4-201ENST00000624722 1615 ntBASIC28.55■■■□□ 2.16
TTC13Q8NBP0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC13Q8NBP0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC13Q8NBP0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC13Q8NBP0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TTC13Q8NBP0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC13Q8NBP0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC13Q8NBP0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC13Q8NBP0 DYNLL1-208ENST00000550178 581 ntBASIC28.5■■■□□ 2.15
TTC13Q8NBP0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC13Q8NBP0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.49■■■□□ 2.15
TTC13Q8NBP0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TTC13Q8NBP0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TTC13Q8NBP0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TTC13Q8NBP0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
TTC13Q8NBP0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.46■■■□□ 2.15
TTC13Q8NBP0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
TTC13Q8NBP0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TTC13Q8NBP0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.45■■■□□ 2.14
TTC13Q8NBP0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.43■■■□□ 2.14
TTC13Q8NBP0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.42■■■□□ 2.14
TTC13Q8NBP0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TTC13Q8NBP0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC13Q8NBP0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
TTC13Q8NBP0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.41■■■□□ 2.14
TTC13Q8NBP0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC13Q8NBP0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TTC13Q8NBP0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TTC13Q8NBP0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
TTC13Q8NBP0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.38■■■□□ 2.13
TTC13Q8NBP0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.35■■■□□ 2.13
TTC13Q8NBP0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.34■■■□□ 2.13
TTC13Q8NBP0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TTC13Q8NBP0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC13Q8NBP0 AL031258.1-201ENST00000623562 325 ntBASIC28.32■■■□□ 2.12
TTC13Q8NBP0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC13Q8NBP0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC13Q8NBP0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.31■■■□□ 2.12
TTC13Q8NBP0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.28■■■□□ 2.12
TTC13Q8NBP0 AP002365.1-201ENST00000603448 772 ntBASIC28.28■■■□□ 2.12
TTC13Q8NBP0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC13Q8NBP0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TTC13Q8NBP0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TTC13Q8NBP0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TTC13Q8NBP0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.25■■■□□ 2.11
TTC13Q8NBP0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC13Q8NBP0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.24■■■□□ 2.11
TTC13Q8NBP0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
TTC13Q8NBP0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC13Q8NBP0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC13Q8NBP0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC13Q8NBP0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TTC13Q8NBP0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TTC13Q8NBP0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TTC13Q8NBP0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TTC13Q8NBP0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TTC13Q8NBP0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC13Q8NBP0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.15■■■□□ 2.1
TTC13Q8NBP0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC13Q8NBP0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC13Q8NBP0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
TTC13Q8NBP0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TTC13Q8NBP0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.13■■■□□ 2.09
TTC13Q8NBP0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TTC13Q8NBP0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
TTC13Q8NBP0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TTC13Q8NBP0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
TTC13Q8NBP0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms