Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCUBE1Q8IWY4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SCUBE1Q8IWY4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCUBE1Q8IWY4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCUBE1Q8IWY4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCUBE1Q8IWY4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.22■■□□□ 1.95
SCUBE1Q8IWY4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCUBE1Q8IWY4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCUBE1Q8IWY4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.2■■□□□ 1.95
SCUBE1Q8IWY4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.19■■□□□ 1.94
SCUBE1Q8IWY4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCUBE1Q8IWY4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SCUBE1Q8IWY4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCUBE1Q8IWY4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCUBE1Q8IWY4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE1Q8IWY4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE1Q8IWY4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.14■■□□□ 1.93
SCUBE1Q8IWY4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.13■■□□□ 1.93
SCUBE1Q8IWY4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCUBE1Q8IWY4 AP002365.1-201ENST00000603448 772 ntBASIC27.1■■□□□ 1.93
SCUBE1Q8IWY4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCUBE1Q8IWY4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
SCUBE1Q8IWY4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCUBE1Q8IWY4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCUBE1Q8IWY4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCUBE1Q8IWY4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SCUBE1Q8IWY4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SCUBE1Q8IWY4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCUBE1Q8IWY4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE1Q8IWY4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE1Q8IWY4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
SCUBE1Q8IWY4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCUBE1Q8IWY4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCUBE1Q8IWY4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SCUBE1Q8IWY4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCUBE1Q8IWY4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.99■■□□□ 1.91
SCUBE1Q8IWY4 ABCB10P1-201ENST00000614297 2181 ntBASIC26.98■■□□□ 1.91
SCUBE1Q8IWY4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
SCUBE1Q8IWY4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.97■■□□□ 1.91
SCUBE1Q8IWY4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SCUBE1Q8IWY4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SCUBE1Q8IWY4 DYNLL1-208ENST00000550178 581 ntBASIC26.96■■□□□ 1.91
SCUBE1Q8IWY4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SCUBE1Q8IWY4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SCUBE1Q8IWY4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
SCUBE1Q8IWY4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SCUBE1Q8IWY4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SCUBE1Q8IWY4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.93■■□□□ 1.9
SCUBE1Q8IWY4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.92■■□□□ 1.9
SCUBE1Q8IWY4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.92■■□□□ 1.9
SCUBE1Q8IWY4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCUBE1Q8IWY4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SCUBE1Q8IWY4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCUBE1Q8IWY4 ABCB10P3-201ENST00000561950 2166 ntBASIC26.88■■□□□ 1.89
SCUBE1Q8IWY4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.87■■□□□ 1.89
SCUBE1Q8IWY4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCUBE1Q8IWY4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCUBE1Q8IWY4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCUBE1Q8IWY4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCUBE1Q8IWY4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.86■■□□□ 1.89
SCUBE1Q8IWY4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
SCUBE1Q8IWY4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SCUBE1Q8IWY4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.86■■□□□ 1.89
SCUBE1Q8IWY4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.85■■□□□ 1.89
SCUBE1Q8IWY4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE1Q8IWY4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE1Q8IWY4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE1Q8IWY4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE1Q8IWY4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCUBE1Q8IWY4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.83■■□□□ 1.89
SCUBE1Q8IWY4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCUBE1Q8IWY4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCUBE1Q8IWY4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCUBE1Q8IWY4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCUBE1Q8IWY4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCUBE1Q8IWY4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SCUBE1Q8IWY4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SCUBE1Q8IWY4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SCUBE1Q8IWY4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.79■■□□□ 1.88
SCUBE1Q8IWY4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SCUBE1Q8IWY4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.78■■□□□ 1.88
SCUBE1Q8IWY4 AL031258.1-201ENST00000623562 325 ntBASIC26.78■■□□□ 1.88
SCUBE1Q8IWY4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.77■■□□□ 1.88
SCUBE1Q8IWY4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.77■■□□□ 1.88
SCUBE1Q8IWY4 AL161658.1-201ENST00000623641 1967 ntBASIC26.77■■□□□ 1.88
SCUBE1Q8IWY4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SCUBE1Q8IWY4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SCUBE1Q8IWY4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SCUBE1Q8IWY4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SCUBE1Q8IWY4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.73■■□□□ 1.87
SCUBE1Q8IWY4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCUBE1Q8IWY4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCUBE1Q8IWY4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
SCUBE1Q8IWY4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCUBE1Q8IWY4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCUBE1Q8IWY4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCUBE1Q8IWY4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCUBE1Q8IWY4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCUBE1Q8IWY4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCUBE1Q8IWY4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms