Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.73■■□□□ 1.71
VRK2Q86Y07 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
VRK2Q86Y07 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VRK2Q86Y07 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VRK2Q86Y07 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.72■■□□□ 1.71
VRK2Q86Y07 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.72■■□□□ 1.71
VRK2Q86Y07 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
VRK2Q86Y07 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
VRK2Q86Y07 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.69■■□□□ 1.7
VRK2Q86Y07 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VRK2Q86Y07 DYNLL1-208ENST00000550178 581 ntBASIC25.69■■□□□ 1.7
VRK2Q86Y07 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
VRK2Q86Y07 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VRK2Q86Y07 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VRK2Q86Y07 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.68■■□□□ 1.7
VRK2Q86Y07 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.68■■□□□ 1.7
VRK2Q86Y07 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
VRK2Q86Y07 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VRK2Q86Y07 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.66■■□□□ 1.7
VRK2Q86Y07 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VRK2Q86Y07 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VRK2Q86Y07 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.63■■□□□ 1.69
VRK2Q86Y07 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VRK2Q86Y07 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VRK2Q86Y07 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
VRK2Q86Y07 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VRK2Q86Y07 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VRK2Q86Y07 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.58■■□□□ 1.69
VRK2Q86Y07 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
VRK2Q86Y07 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VRK2Q86Y07 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VRK2Q86Y07 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VRK2Q86Y07 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VRK2Q86Y07 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
VRK2Q86Y07 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.54■■□□□ 1.68
VRK2Q86Y07 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.54■■□□□ 1.68
VRK2Q86Y07 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
VRK2Q86Y07 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.53■■□□□ 1.68
VRK2Q86Y07 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VRK2Q86Y07 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VRK2Q86Y07 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VRK2Q86Y07 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
VRK2Q86Y07 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VRK2Q86Y07 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.51■■□□□ 1.67
VRK2Q86Y07 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VRK2Q86Y07 AL031258.1-201ENST00000623562 325 ntBASIC25.51■■□□□ 1.67
VRK2Q86Y07 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
VRK2Q86Y07 AP002365.1-201ENST00000603448 772 ntBASIC25.5■■□□□ 1.67
VRK2Q86Y07 AC120057.4-201ENST00000624722 1615 ntBASIC25.5■■□□□ 1.67
VRK2Q86Y07 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.49■■□□□ 1.67
VRK2Q86Y07 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.48■■□□□ 1.67
VRK2Q86Y07 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
VRK2Q86Y07 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VRK2Q86Y07 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.47■■□□□ 1.67
VRK2Q86Y07 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
VRK2Q86Y07 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
VRK2Q86Y07 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VRK2Q86Y07 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.43■■□□□ 1.66
VRK2Q86Y07 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
VRK2Q86Y07 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.42■■□□□ 1.66
VRK2Q86Y07 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
VRK2Q86Y07 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.4■■□□□ 1.66
VRK2Q86Y07 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VRK2Q86Y07 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VRK2Q86Y07 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
VRK2Q86Y07 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.38■■□□□ 1.65
VRK2Q86Y07 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
VRK2Q86Y07 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
VRK2Q86Y07 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VRK2Q86Y07 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
VRK2Q86Y07 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.32■■□□□ 1.64
VRK2Q86Y07 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.3■■□□□ 1.64
VRK2Q86Y07 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
VRK2Q86Y07 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
VRK2Q86Y07 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
VRK2Q86Y07 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.29■■□□□ 1.64
VRK2Q86Y07 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VRK2Q86Y07 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VRK2Q86Y07 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VRK2Q86Y07 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
VRK2Q86Y07 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VRK2Q86Y07 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
VRK2Q86Y07 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
VRK2Q86Y07 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VRK2Q86Y07 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
VRK2Q86Y07 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
VRK2Q86Y07 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.23■■□□□ 1.63
VRK2Q86Y07 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
VRK2Q86Y07 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VRK2Q86Y07 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.23■■□□□ 1.63
VRK2Q86Y07 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VRK2Q86Y07 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VRK2Q86Y07 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VRK2Q86Y07 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.19■■□□□ 1.62
VRK2Q86Y07 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VRK2Q86Y07 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
VRK2Q86Y07 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
VRK2Q86Y07 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VRK2Q86Y07 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRK2Q86Y07 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms