Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01554Q52M75 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01554Q52M75 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01554Q52M75 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC01554Q52M75 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01554Q52M75 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01554Q52M75 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01554Q52M75 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01554Q52M75 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01554Q52M75 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01554Q52M75 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01554Q52M75 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01554Q52M75 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01554Q52M75 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
LINC01554Q52M75 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01554Q52M75 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01554Q52M75 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01554Q52M75 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01554Q52M75 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01554Q52M75 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
LINC01554Q52M75 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01554Q52M75 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC01554Q52M75 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01554Q52M75 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
LINC01554Q52M75 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01554Q52M75 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01554Q52M75 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC01554Q52M75 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01554Q52M75 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01554Q52M75 SNAI3-AS1-204ENST00000567997 2048 ntBASIC13.86□□□□□ -0.19
LINC01554Q52M75 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01554Q52M75 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01554Q52M75 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01554Q52M75 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01554Q52M75 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01554Q52M75 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01554Q52M75 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01554Q52M75 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01554Q52M75 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01554Q52M75 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01554Q52M75 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01554Q52M75 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
LINC01554Q52M75 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01554Q52M75 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01554Q52M75 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01554Q52M75 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01554Q52M75 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01554Q52M75 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01554Q52M75 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01554Q52M75 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01554Q52M75 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01554Q52M75 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01554Q52M75 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01554Q52M75 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01554Q52M75 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01554Q52M75 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01554Q52M75 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01554Q52M75 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01554Q52M75 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01554Q52M75 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC01554Q52M75 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01554Q52M75 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01554Q52M75 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01554Q52M75 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01554Q52M75 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01554Q52M75 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
LINC01554Q52M75 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC01554Q52M75 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01554Q52M75 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01554Q52M75 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01554Q52M75 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01554Q52M75 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01554Q52M75 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01554Q52M75 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01554Q52M75 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01554Q52M75 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01554Q52M75 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01554Q52M75 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01554Q52M75 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01554Q52M75 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01554Q52M75 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01554Q52M75 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC01554Q52M75 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC01554Q52M75 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC01554Q52M75 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01554Q52M75 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01554Q52M75 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01554Q52M75 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01554Q52M75 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01554Q52M75 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC01554Q52M75 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01554Q52M75 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01554Q52M75 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01554Q52M75 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01554Q52M75 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01554Q52M75 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC01554Q52M75 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01554Q52M75 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01554Q52M75 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01554Q52M75 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms