Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
HTRA3P83110 MIR3665-201ENST00000578708 105 ntBASIC34.29■■■■□ 3.08
HTRA3P83110 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC34.27■■■■□ 3.08
HTRA3P83110 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.27■■■■□ 3.08
HTRA3P83110 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.26■■■■□ 3.08
HTRA3P83110 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
HTRA3P83110 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
HTRA3P83110 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
HTRA3P83110 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.22■■■■□ 3.07
HTRA3P83110 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC34.22■■■■□ 3.07
HTRA3P83110 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
HTRA3P83110 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
HTRA3P83110 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC34.16■■■■□ 3.06
HTRA3P83110 ZNRF2P2-203ENST00000454624 420 ntBASIC34.15■■■■□ 3.06
HTRA3P83110 RPS2-202ENST00000526522 924 ntTSL 2 BASIC34.15■■■■□ 3.06
HTRA3P83110 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.15■■■■□ 3.06
HTRA3P83110 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
HTRA3P83110 DUX4L28-201ENST00000623687 678 ntBASIC34.14■■■■□ 3.06
HTRA3P83110 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
HTRA3P83110 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC34.06■■■■□ 3.04
HTRA3P83110 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.06■■■■□ 3.04
HTRA3P83110 AC044849.2-201ENST00000606596 710 ntBASIC34.05■■■■□ 3.04
HTRA3P83110 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
HTRA3P83110 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC34.02■■■■□ 3.04
HTRA3P83110 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC34.02■■■■□ 3.04
HTRA3P83110 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC34■■■■□ 3.03
HTRA3P83110 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
HTRA3P83110 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.96■■■■□ 3.03
HTRA3P83110 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC33.96■■■■□ 3.03
HTRA3P83110 MIR4449-201ENST00000578365 66 ntBASIC33.96■■■■□ 3.03
HTRA3P83110 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
HTRA3P83110 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
HTRA3P83110 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.9■■■■□ 3.02
HTRA3P83110 AL133380.1-201ENST00000506013 324 ntBASIC33.9■■■■□ 3.02
HTRA3P83110 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.9■■■■□ 3.02
HTRA3P83110 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.89■■■■□ 3.02
HTRA3P83110 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.89■■■■□ 3.02
HTRA3P83110 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
HTRA3P83110 HSD17B1P1-201ENST00000590052 955 ntBASIC33.85■■■■□ 3.01
HTRA3P83110 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.82■■■■□ 3
HTRA3P83110 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
HTRA3P83110 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC33.79■■■■□ 3
HTRA3P83110 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
HTRA3P83110 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC33.75■■■□□ 2.99
HTRA3P83110 MIR762-201ENST00000390236 83 ntBASIC33.75■■■□□ 2.99
HTRA3P83110 CHML-205ENST00000638160 705 ntTSL 3 BASIC33.75■■■□□ 2.99
HTRA3P83110 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.74■■■□□ 2.99
HTRA3P83110 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.74■■■□□ 2.99
HTRA3P83110 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
HTRA3P83110 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
HTRA3P83110 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.72■■■□□ 2.99
HTRA3P83110 AC005559.1-201ENST00000589661 871 ntBASIC33.72■■■□□ 2.99
HTRA3P83110 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.71■■■□□ 2.99
HTRA3P83110 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
HTRA3P83110 MIR639-201ENST00000384974 98 ntBASIC33.69■■■□□ 2.98
HTRA3P83110 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
HTRA3P83110 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.65■■■□□ 2.98
HTRA3P83110 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
HTRA3P83110 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
HTRA3P83110 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
HTRA3P83110 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.62■■■□□ 2.97
HTRA3P83110 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HTRA3P83110 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.61■■■□□ 2.97
HTRA3P83110 AC145285.7-201ENST00000614819 1539 ntBASIC33.6■■■□□ 2.97
HTRA3P83110 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.6■■■□□ 2.97
HTRA3P83110 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
HTRA3P83110 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
HTRA3P83110 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.56■■■□□ 2.96
HTRA3P83110 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC33.55■■■□□ 2.96
HTRA3P83110 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
HTRA3P83110 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
HTRA3P83110 MVK-208ENST00000539696 608 ntTSL 5 BASIC33.52■■■□□ 2.96
HTRA3P83110 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.52■■■□□ 2.96
HTRA3P83110 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
HTRA3P83110 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.5■■■□□ 2.95
HTRA3P83110 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
HTRA3P83110 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.41■■■□□ 2.94
HTRA3P83110 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
HTRA3P83110 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.41■■■□□ 2.94
HTRA3P83110 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC33.38■■■□□ 2.93
HTRA3P83110 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.38■■■□□ 2.93
HTRA3P83110 ABHD17AP3-201ENST00000503096 1137 ntBASIC33.38■■■□□ 2.93
HTRA3P83110 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
HTRA3P83110 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
HTRA3P83110 AC016575.1-201ENST00000607026 382 ntBASIC33.37■■■□□ 2.93
HTRA3P83110 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
HTRA3P83110 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.31■■■□□ 2.92
HTRA3P83110 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
HTRA3P83110 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.31■■■□□ 2.92
HTRA3P83110 DUX4L29-201ENST00000425409 679 ntBASIC33.3■■■□□ 2.92
HTRA3P83110 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC33.3■■■□□ 2.92
HTRA3P83110 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
HTRA3P83110 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.29■■■□□ 2.92
HTRA3P83110 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
HTRA3P83110 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
HTRA3P83110 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
HTRA3P83110 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC33.28■■■□□ 2.92
HTRA3P83110 MIR3648-2-201ENST00000581792 180 ntBASIC33.27■■■□□ 2.92
HTRA3P83110 MIR3648-1-201ENST00000615959 180 ntBASIC33.27■■■□□ 2.92
HTRA3P83110 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms