Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SNCGO76070 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SNCGO76070 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNCGO76070 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNCGO76070 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNCGO76070 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNCGO76070 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNCGO76070 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNCGO76070 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNCGO76070 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNCGO76070 ILK-212ENST00000532063 1617 ntTSL 2 BASIC18.91■□□□□ 0.62
SNCGO76070 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNCGO76070 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNCGO76070 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.88■□□□□ 0.61
SNCGO76070 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNCGO76070 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCGO76070 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNCGO76070 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNCGO76070 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCGO76070 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC18.84■□□□□ 0.61
SNCGO76070 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SNCGO76070 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNCGO76070 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNCGO76070 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNCGO76070 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCGO76070 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCGO76070 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCGO76070 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCGO76070 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCGO76070 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCGO76070 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCGO76070 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNCGO76070 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNCGO76070 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNCGO76070 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.8■□□□□ 0.6
SNCGO76070 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNCGO76070 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.78■□□□□ 0.6
SNCGO76070 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNCGO76070 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNCGO76070 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNCGO76070 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCGO76070 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNCGO76070 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCGO76070 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCGO76070 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNCGO76070 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNCGO76070 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCGO76070 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNCGO76070 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCGO76070 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.72■□□□□ 0.59
SNCGO76070 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCGO76070 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.72■□□□□ 0.59
SNCGO76070 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCGO76070 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNCGO76070 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCGO76070 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNCGO76070 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SNCGO76070 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCGO76070 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCGO76070 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCGO76070 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCGO76070 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNCGO76070 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNCGO76070 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNCGO76070 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNCGO76070 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNCGO76070 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNCGO76070 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNCGO76070 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNCGO76070 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNCGO76070 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.63■□□□□ 0.57
SNCGO76070 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNCGO76070 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNCGO76070 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNCGO76070 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.61■□□□□ 0.57
SNCGO76070 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNCGO76070 AC135731.1-201ENST00000569415 2548 ntBASIC18.6■□□□□ 0.57
SNCGO76070 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNCGO76070 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNCGO76070 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCGO76070 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCGO76070 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNCGO76070 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNCGO76070 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.58■□□□□ 0.56
SNCGO76070 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCGO76070 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.57■□□□□ 0.56
SNCGO76070 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCGO76070 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCGO76070 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNCGO76070 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNCGO76070 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SNCGO76070 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNCGO76070 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNCGO76070 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SNCGO76070 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNCGO76070 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNCGO76070 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNCGO76070 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNCGO76070 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNCGO76070 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms