Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.85■■□□□ 1.89
SNRNP200O75643 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.84■■□□□ 1.89
SNRNP200O75643 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP200O75643 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRNP200O75643 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.82■■□□□ 1.88
SNRNP200O75643 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRNP200O75643 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
SNRNP200O75643 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRNP200O75643 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.8■■□□□ 1.88
SNRNP200O75643 AC136428.2-201ENST00000563187 214 ntBASIC26.78■■□□□ 1.88
SNRNP200O75643 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.77■■□□□ 1.88
SNRNP200O75643 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRNP200O75643 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRNP200O75643 SETD8P1-201ENST00000623146 1180 ntBASIC26.75■■□□□ 1.87
SNRNP200O75643 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
SNRNP200O75643 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.74■■□□□ 1.87
SNRNP200O75643 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.74■■□□□ 1.87
SNRNP200O75643 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
SNRNP200O75643 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRNP200O75643 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRNP200O75643 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRNP200O75643 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRNP200O75643 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.69■■□□□ 1.86
SNRNP200O75643 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRNP200O75643 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRNP200O75643 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRNP200O75643 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRNP200O75643 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.65■■□□□ 1.86
SNRNP200O75643 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.65■■□□□ 1.86
SNRNP200O75643 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNRNP200O75643 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNRNP200O75643 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNRNP200O75643 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SNRNP200O75643 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNRNP200O75643 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SNRNP200O75643 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
SNRNP200O75643 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SNRNP200O75643 AL133380.1-201ENST00000506013 324 ntBASIC26.59■■□□□ 1.85
SNRNP200O75643 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP200O75643 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP200O75643 AC097358.2-201ENST00000607541 1159 ntBASIC26.56■■□□□ 1.84
SNRNP200O75643 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.55■■□□□ 1.84
SNRNP200O75643 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP200O75643 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.54■■□□□ 1.84
SNRNP200O75643 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRNP200O75643 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.53■■□□□ 1.84
SNRNP200O75643 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.52■■□□□ 1.84
SNRNP200O75643 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.51■■□□□ 1.83
SNRNP200O75643 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNRNP200O75643 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP200O75643 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP200O75643 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.49■■□□□ 1.83
SNRNP200O75643 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP200O75643 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP200O75643 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.47■■□□□ 1.83
SNRNP200O75643 SUZ12P1-203ENST00000578195 985 ntBASIC26.47■■□□□ 1.83
SNRNP200O75643 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRNP200O75643 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.47■■□□□ 1.83
SNRNP200O75643 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP200O75643 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP200O75643 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SNRNP200O75643 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNRNP200O75643 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRNP200O75643 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.44■■□□□ 1.82
SNRNP200O75643 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.43■■□□□ 1.82
SNRNP200O75643 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNRNP200O75643 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNRNP200O75643 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRNP200O75643 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNRNP200O75643 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRNP200O75643 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNRNP200O75643 AL391121.1-201ENST00000607967 1349 ntBASIC26.37■■□□□ 1.81
SNRNP200O75643 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.37■■□□□ 1.81
SNRNP200O75643 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNRNP200O75643 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRNP200O75643 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNRNP200O75643 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
SNRNP200O75643 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNRNP200O75643 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.3■■□□□ 1.8
SNRNP200O75643 AC120057.4-201ENST00000624722 1615 ntBASIC26.29■■□□□ 1.8
SNRNP200O75643 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP200O75643 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP200O75643 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP200O75643 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
SNRNP200O75643 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.26■■□□□ 1.79
SNRNP200O75643 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SNRNP200O75643 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP200O75643 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP200O75643 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.25■■□□□ 1.79
SNRNP200O75643 CAHM-201ENST00000604200 896 ntBASIC26.24■■□□□ 1.79
SNRNP200O75643 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP200O75643 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.24■■□□□ 1.79
SNRNP200O75643 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP200O75643 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.22■■□□□ 1.79
SNRNP200O75643 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP200O75643 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP200O75643 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms