Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF4EBP3O60516 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF4EBP3O60516 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EIF4EBP3O60516 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF4EBP3O60516 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
EIF4EBP3O60516 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF4EBP3O60516 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
EIF4EBP3O60516 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF4EBP3O60516 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF4EBP3O60516 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EIF4EBP3O60516 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF4EBP3O60516 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EIF4EBP3O60516 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EIF4EBP3O60516 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EIF4EBP3O60516 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EIF4EBP3O60516 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EIF4EBP3O60516 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF4EBP3O60516 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF4EBP3O60516 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF4EBP3O60516 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF4EBP3O60516 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EIF4EBP3O60516 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF4EBP3O60516 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EIF4EBP3O60516 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EIF4EBP3O60516 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EIF4EBP3O60516 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EIF4EBP3O60516 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EIF4EBP3O60516 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF4EBP3O60516 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF4EBP3O60516 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EIF4EBP3O60516 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF4EBP3O60516 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF4EBP3O60516 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF4EBP3O60516 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF4EBP3O60516 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
EIF4EBP3O60516 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF4EBP3O60516 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EIF4EBP3O60516 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
EIF4EBP3O60516 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF4EBP3O60516 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF4EBP3O60516 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF4EBP3O60516 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EIF4EBP3O60516 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EIF4EBP3O60516 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EIF4EBP3O60516 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.56■□□□□ 0.56
EIF4EBP3O60516 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EIF4EBP3O60516 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EIF4EBP3O60516 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
EIF4EBP3O60516 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
EIF4EBP3O60516 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EIF4EBP3O60516 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.52■□□□□ 0.55
EIF4EBP3O60516 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF4EBP3O60516 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EIF4EBP3O60516 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF4EBP3O60516 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF4EBP3O60516 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EIF4EBP3O60516 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EIF4EBP3O60516 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EIF4EBP3O60516 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EIF4EBP3O60516 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.47■□□□□ 0.55
EIF4EBP3O60516 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EIF4EBP3O60516 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
EIF4EBP3O60516 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EIF4EBP3O60516 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EIF4EBP3O60516 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EIF4EBP3O60516 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EIF4EBP3O60516 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
EIF4EBP3O60516 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EIF4EBP3O60516 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
EIF4EBP3O60516 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EIF4EBP3O60516 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EIF4EBP3O60516 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EIF4EBP3O60516 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EIF4EBP3O60516 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.4■□□□□ 0.54
EIF4EBP3O60516 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.4■□□□□ 0.54
EIF4EBP3O60516 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EIF4EBP3O60516 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EIF4EBP3O60516 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EIF4EBP3O60516 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.39■□□□□ 0.53
EIF4EBP3O60516 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EIF4EBP3O60516 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EIF4EBP3O60516 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EIF4EBP3O60516 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF4EBP3O60516 AC135731.1-201ENST00000569415 2548 ntBASIC18.38■□□□□ 0.53
EIF4EBP3O60516 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF4EBP3O60516 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.37■□□□□ 0.53
EIF4EBP3O60516 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF4EBP3O60516 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF4EBP3O60516 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF4EBP3O60516 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF4EBP3O60516 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EIF4EBP3O60516 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
EIF4EBP3O60516 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EIF4EBP3O60516 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.33■□□□□ 0.52
EIF4EBP3O60516 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms