Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
TNRC18O15417 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
TNRC18O15417 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
TNRC18O15417 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TNRC18O15417 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.26■■■□□ 2.76
TNRC18O15417 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TNRC18O15417 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TNRC18O15417 HSD17B1P1-201ENST00000590052 955 ntBASIC32.22■■■□□ 2.75
TNRC18O15417 DUX4L28-201ENST00000623687 678 ntBASIC32.22■■■□□ 2.75
TNRC18O15417 AC044849.2-201ENST00000606596 710 ntBASIC32.21■■■□□ 2.75
TNRC18O15417 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TNRC18O15417 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TNRC18O15417 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.19■■■□□ 2.74
TNRC18O15417 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.16■■■□□ 2.74
TNRC18O15417 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.16■■■□□ 2.74
TNRC18O15417 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.14■■■□□ 2.74
TNRC18O15417 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
TNRC18O15417 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.11■■■□□ 2.73
TNRC18O15417 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.11■■■□□ 2.73
TNRC18O15417 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TNRC18O15417 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.09■■■□□ 2.73
TNRC18O15417 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TNRC18O15417 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.73
TNRC18O15417 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TNRC18O15417 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.06■■■□□ 2.72
TNRC18O15417 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TNRC18O15417 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.04■■■□□ 2.72
TNRC18O15417 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.02■■■□□ 2.72
TNRC18O15417 ZNRF2P2-203ENST00000454624 420 ntBASIC32.02■■■□□ 2.72
TNRC18O15417 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32■■■□□ 2.71
TNRC18O15417 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
TNRC18O15417 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TNRC18O15417 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
TNRC18O15417 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
TNRC18O15417 MIR639-201ENST00000384974 98 ntBASIC31.93■■■□□ 2.7
TNRC18O15417 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TNRC18O15417 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TNRC18O15417 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TNRC18O15417 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.69
TNRC18O15417 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.89■■■□□ 2.69
TNRC18O15417 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.84■■■□□ 2.69
TNRC18O15417 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TNRC18O15417 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.82■■■□□ 2.68
TNRC18O15417 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.82■■■□□ 2.68
TNRC18O15417 AC005559.1-201ENST00000589661 871 ntBASIC31.8■■■□□ 2.68
TNRC18O15417 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TNRC18O15417 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.77■■■□□ 2.68
TNRC18O15417 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
TNRC18O15417 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.77■■■□□ 2.68
TNRC18O15417 AL133380.1-201ENST00000506013 324 ntBASIC31.76■■■□□ 2.68
TNRC18O15417 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.74■■■□□ 2.67
TNRC18O15417 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.73■■■□□ 2.67
TNRC18O15417 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TNRC18O15417 MIR762-201ENST00000390236 83 ntBASIC31.71■■■□□ 2.67
TNRC18O15417 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TNRC18O15417 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
TNRC18O15417 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.7■■■□□ 2.66
TNRC18O15417 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TNRC18O15417 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.69■■■□□ 2.66
TNRC18O15417 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
TNRC18O15417 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
TNRC18O15417 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TNRC18O15417 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.62■■■□□ 2.65
TNRC18O15417 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TNRC18O15417 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TNRC18O15417 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.6■■■□□ 2.65
TNRC18O15417 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.6■■■□□ 2.65
TNRC18O15417 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
TNRC18O15417 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TNRC18O15417 MIR3648-2-201ENST00000581792 180 ntBASIC31.56■■■□□ 2.64
TNRC18O15417 MIR3648-1-201ENST00000615959 180 ntBASIC31.56■■■□□ 2.64
TNRC18O15417 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.54■■■□□ 2.64
TNRC18O15417 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.54■■■□□ 2.64
TNRC18O15417 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
TNRC18O15417 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNRC18O15417 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.53■■■□□ 2.64
TNRC18O15417 AC016575.1-201ENST00000607026 382 ntBASIC31.53■■■□□ 2.64
TNRC18O15417 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TNRC18O15417 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TNRC18O15417 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNRC18O15417 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.45■■■□□ 2.63
TNRC18O15417 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
TNRC18O15417 AC145285.7-201ENST00000614819 1539 ntBASIC31.44■■■□□ 2.62
TNRC18O15417 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.44■■■□□ 2.62
TNRC18O15417 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.43■■■□□ 2.62
TNRC18O15417 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TNRC18O15417 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNRC18O15417 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNRC18O15417 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TNRC18O15417 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.36■■■□□ 2.61
TNRC18O15417 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNRC18O15417 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.35■■■□□ 2.61
TNRC18O15417 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.35■■■□□ 2.61
TNRC18O15417 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
TNRC18O15417 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
TNRC18O15417 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms