Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CASQ2O14958 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CASQ2O14958 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CASQ2O14958 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CASQ2O14958 ABCB10P1-201ENST00000614297 2181 ntBASIC26.54■■□□□ 1.84
CASQ2O14958 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.51■■□□□ 1.84
CASQ2O14958 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CASQ2O14958 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CASQ2O14958 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.49■■□□□ 1.83
CASQ2O14958 ABCB10P3-201ENST00000561950 2166 ntBASIC26.48■■□□□ 1.83
CASQ2O14958 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CASQ2O14958 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CASQ2O14958 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.46■■□□□ 1.83
CASQ2O14958 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CASQ2O14958 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CASQ2O14958 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CASQ2O14958 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CASQ2O14958 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CASQ2O14958 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CASQ2O14958 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.42■■□□□ 1.82
CASQ2O14958 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CASQ2O14958 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.4■■□□□ 1.82
CASQ2O14958 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
CASQ2O14958 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.38■■□□□ 1.81
CASQ2O14958 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASQ2O14958 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASQ2O14958 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASQ2O14958 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CASQ2O14958 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASQ2O14958 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CASQ2O14958 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASQ2O14958 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASQ2O14958 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASQ2O14958 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASQ2O14958 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASQ2O14958 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.32■■□□□ 1.8
CASQ2O14958 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASQ2O14958 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASQ2O14958 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CASQ2O14958 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.29■■□□□ 1.8
CASQ2O14958 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASQ2O14958 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASQ2O14958 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CASQ2O14958 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CASQ2O14958 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CASQ2O14958 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASQ2O14958 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CASQ2O14958 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CASQ2O14958 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASQ2O14958 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASQ2O14958 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
CASQ2O14958 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CASQ2O14958 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CASQ2O14958 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.19■■□□□ 1.78
CASQ2O14958 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CASQ2O14958 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CASQ2O14958 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASQ2O14958 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CASQ2O14958 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CASQ2O14958 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASQ2O14958 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.13■■□□□ 1.77
CASQ2O14958 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASQ2O14958 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
CASQ2O14958 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASQ2O14958 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.09■■□□□ 1.77
CASQ2O14958 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASQ2O14958 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASQ2O14958 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CASQ2O14958 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CASQ2O14958 AC139426.1-201ENST00000568218 2529 ntBASIC26.07■■□□□ 1.76
CASQ2O14958 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASQ2O14958 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
CASQ2O14958 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASQ2O14958 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.05■■□□□ 1.76
CASQ2O14958 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CASQ2O14958 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CASQ2O14958 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CASQ2O14958 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.03■■□□□ 1.76
CASQ2O14958 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CASQ2O14958 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
CASQ2O14958 AC120057.4-201ENST00000624722 1615 ntBASIC25.96■■□□□ 1.75
CASQ2O14958 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CASQ2O14958 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CASQ2O14958 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.94■■□□□ 1.74
CASQ2O14958 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CASQ2O14958 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CASQ2O14958 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CASQ2O14958 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms