Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNFSF11O14788 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNFSF11O14788 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNFSF11O14788 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
TNFSF11O14788 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNFSF11O14788 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.95■■□□□ 1.58
TNFSF11O14788 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.95■■□□□ 1.58
TNFSF11O14788 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.95■■□□□ 1.58
TNFSF11O14788 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TNFSF11O14788 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.93■■□□□ 1.58
TNFSF11O14788 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.93■■□□□ 1.58
TNFSF11O14788 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
TNFSF11O14788 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.92■■□□□ 1.58
TNFSF11O14788 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
TNFSF11O14788 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TNFSF11O14788 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFSF11O14788 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
TNFSF11O14788 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TNFSF11O14788 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
TNFSF11O14788 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TNFSF11O14788 SETD8P1-201ENST00000623146 1180 ntBASIC24.88■■□□□ 1.57
TNFSF11O14788 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF11O14788 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.87■■□□□ 1.57
TNFSF11O14788 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF11O14788 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFSF11O14788 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.86■■□□□ 1.57
TNFSF11O14788 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFSF11O14788 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TNFSF11O14788 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNFSF11O14788 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TNFSF11O14788 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TNFSF11O14788 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TNFSF11O14788 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.82■■□□□ 1.56
TNFSF11O14788 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.82■■□□□ 1.56
TNFSF11O14788 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNFSF11O14788 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNFSF11O14788 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TNFSF11O14788 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TNFSF11O14788 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.79■■□□□ 1.56
TNFSF11O14788 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNFSF11O14788 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TNFSF11O14788 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFSF11O14788 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
TNFSF11O14788 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
TNFSF11O14788 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.77■■□□□ 1.56
TNFSF11O14788 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.74■■□□□ 1.55
TNFSF11O14788 AC097358.2-201ENST00000607541 1159 ntBASIC24.74■■□□□ 1.55
TNFSF11O14788 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TNFSF11O14788 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.73■■□□□ 1.55
TNFSF11O14788 AL133380.1-201ENST00000506013 324 ntBASIC24.72■■□□□ 1.55
TNFSF11O14788 AC136428.2-201ENST00000563187 214 ntBASIC24.71■■□□□ 1.55
TNFSF11O14788 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TNFSF11O14788 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNFSF11O14788 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TNFSF11O14788 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TNFSF11O14788 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.68■■□□□ 1.54
TNFSF11O14788 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TNFSF11O14788 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.67■■□□□ 1.54
TNFSF11O14788 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFSF11O14788 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFSF11O14788 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFSF11O14788 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TNFSF11O14788 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.65■■□□□ 1.54
TNFSF11O14788 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.64■■□□□ 1.53
TNFSF11O14788 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNFSF11O14788 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.63■■□□□ 1.53
TNFSF11O14788 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.63■■□□□ 1.53
TNFSF11O14788 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.62■■□□□ 1.53
TNFSF11O14788 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.61■■□□□ 1.53
TNFSF11O14788 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNFSF11O14788 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNFSF11O14788 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.59■■□□□ 1.53
TNFSF11O14788 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.59■■□□□ 1.53
TNFSF11O14788 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
TNFSF11O14788 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNFSF11O14788 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
TNFSF11O14788 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TNFSF11O14788 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TNFSF11O14788 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TNFSF11O14788 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
TNFSF11O14788 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFSF11O14788 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TNFSF11O14788 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TNFSF11O14788 AC120057.4-201ENST00000624722 1615 ntBASIC24.53■■□□□ 1.52
TNFSF11O14788 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.52■■□□□ 1.52
TNFSF11O14788 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNFSF11O14788 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
TNFSF11O14788 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TNFSF11O14788 CAHM-201ENST00000604200 896 ntBASIC24.51■■□□□ 1.51
TNFSF11O14788 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNFSF11O14788 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.49■■□□□ 1.51
TNFSF11O14788 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TNFSF11O14788 AL391121.1-201ENST00000607967 1349 ntBASIC24.48■■□□□ 1.51
TNFSF11O14788 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNFSF11O14788 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFSF11O14788 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.45■■□□□ 1.5
TNFSF11O14788 SUZ12P1-203ENST00000578195 985 ntBASIC24.45■■□□□ 1.5
TNFSF11O14788 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNFSF11O14788 WASH5P-204ENST00000632292 975 ntBASIC24.44■■□□□ 1.5
TNFSF11O14788 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms