Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01546A6NGU7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01546A6NGU7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01546A6NGU7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01546A6NGU7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01546A6NGU7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC01546A6NGU7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.06■□□□□ 0.8
LINC01546A6NGU7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01546A6NGU7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01546A6NGU7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01546A6NGU7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01546A6NGU7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01546A6NGU7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01546A6NGU7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01546A6NGU7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01546A6NGU7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01546A6NGU7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LINC01546A6NGU7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01546A6NGU7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01546A6NGU7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01546A6NGU7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01546A6NGU7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01546A6NGU7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01546A6NGU7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01546A6NGU7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01546A6NGU7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.96■□□□□ 0.79
LINC01546A6NGU7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC01546A6NGU7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01546A6NGU7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.93■□□□□ 0.78
LINC01546A6NGU7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01546A6NGU7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01546A6NGU7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
LINC01546A6NGU7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LINC01546A6NGU7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01546A6NGU7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
LINC01546A6NGU7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LINC01546A6NGU7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01546A6NGU7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LINC01546A6NGU7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01546A6NGU7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01546A6NGU7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01546A6NGU7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.87■□□□□ 0.77
LINC01546A6NGU7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01546A6NGU7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
LINC01546A6NGU7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01546A6NGU7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01546A6NGU7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01546A6NGU7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LINC01546A6NGU7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC01546A6NGU7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.82■□□□□ 0.76
LINC01546A6NGU7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC01546A6NGU7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC01546A6NGU7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01546A6NGU7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC01546A6NGU7 AC120057.4-201ENST00000624722 1615 ntBASIC19.77■□□□□ 0.76
LINC01546A6NGU7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.76■□□□□ 0.75
LINC01546A6NGU7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LINC01546A6NGU7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01546A6NGU7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01546A6NGU7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01546A6NGU7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.74■□□□□ 0.75
LINC01546A6NGU7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01546A6NGU7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01546A6NGU7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LINC01546A6NGU7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LINC01546A6NGU7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01546A6NGU7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LINC01546A6NGU7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01546A6NGU7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01546A6NGU7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LINC01546A6NGU7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01546A6NGU7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01546A6NGU7 AC139426.1-201ENST00000568218 2529 ntBASIC19.67■□□□□ 0.74
LINC01546A6NGU7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01546A6NGU7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01546A6NGU7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01546A6NGU7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINC01546A6NGU7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01546A6NGU7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC01546A6NGU7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LINC01546A6NGU7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINC01546A6NGU7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01546A6NGU7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINC01546A6NGU7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01546A6NGU7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01546A6NGU7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01546A6NGU7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01546A6NGU7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01546A6NGU7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01546A6NGU7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC01546A6NGU7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LINC01546A6NGU7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01546A6NGU7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01546A6NGU7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01546A6NGU7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC01546A6NGU7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01546A6NGU7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01546A6NGU7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01546A6NGU7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01546A6NGU7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms