Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
TRIM49BA6NDI0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
TRIM49BA6NDI0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM49BA6NDI0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
TRIM49BA6NDI0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
TRIM49BA6NDI0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.75■■■□□ 2.51
TRIM49BA6NDI0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.75■■■□□ 2.51
TRIM49BA6NDI0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
TRIM49BA6NDI0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.73■■■□□ 2.51
TRIM49BA6NDI0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM49BA6NDI0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM49BA6NDI0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM49BA6NDI0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
TRIM49BA6NDI0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.7■■■□□ 2.51
TRIM49BA6NDI0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.51
TRIM49BA6NDI0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM49BA6NDI0 DYNLL1-208ENST00000550178 581 ntBASIC30.7■■■□□ 2.51
TRIM49BA6NDI0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM49BA6NDI0 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.64■■■□□ 2.5
TRIM49BA6NDI0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM49BA6NDI0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM49BA6NDI0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM49BA6NDI0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM49BA6NDI0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM49BA6NDI0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM49BA6NDI0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
TRIM49BA6NDI0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM49BA6NDI0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM49BA6NDI0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM49BA6NDI0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM49BA6NDI0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.57■■■□□ 2.48
TRIM49BA6NDI0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.57■■■□□ 2.48
TRIM49BA6NDI0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM49BA6NDI0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
TRIM49BA6NDI0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TRIM49BA6NDI0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM49BA6NDI0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.55■■■□□ 2.48
TRIM49BA6NDI0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM49BA6NDI0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.53■■■□□ 2.48
TRIM49BA6NDI0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.52■■■□□ 2.48
TRIM49BA6NDI0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM49BA6NDI0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM49BA6NDI0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.51■■■□□ 2.47
TRIM49BA6NDI0 AC120057.4-201ENST00000624722 1615 ntBASIC30.51■■■□□ 2.47
TRIM49BA6NDI0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM49BA6NDI0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM49BA6NDI0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM49BA6NDI0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM49BA6NDI0 AL031258.1-201ENST00000623562 325 ntBASIC30.49■■■□□ 2.47
TRIM49BA6NDI0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM49BA6NDI0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
TRIM49BA6NDI0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM49BA6NDI0 AP002365.1-201ENST00000603448 772 ntBASIC30.46■■■□□ 2.47
TRIM49BA6NDI0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM49BA6NDI0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM49BA6NDI0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRIM49BA6NDI0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
TRIM49BA6NDI0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TRIM49BA6NDI0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.42■■■□□ 2.46
TRIM49BA6NDI0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.41■■■□□ 2.46
TRIM49BA6NDI0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TRIM49BA6NDI0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
TRIM49BA6NDI0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRIM49BA6NDI0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
TRIM49BA6NDI0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.35■■■□□ 2.45
TRIM49BA6NDI0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.34■■■□□ 2.45
TRIM49BA6NDI0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TRIM49BA6NDI0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TRIM49BA6NDI0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM49BA6NDI0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.32■■■□□ 2.44
TRIM49BA6NDI0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TRIM49BA6NDI0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM49BA6NDI0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TRIM49BA6NDI0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
TRIM49BA6NDI0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.26■■■□□ 2.44
TRIM49BA6NDI0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TRIM49BA6NDI0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM49BA6NDI0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM49BA6NDI0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM49BA6NDI0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM49BA6NDI0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.19■■■□□ 2.42
TRIM49BA6NDI0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
TRIM49BA6NDI0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
TRIM49BA6NDI0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM49BA6NDI0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TRIM49BA6NDI0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TRIM49BA6NDI0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TRIM49BA6NDI0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TRIM49BA6NDI0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TRIM49BA6NDI0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.14■■■□□ 2.42
TRIM49BA6NDI0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.14■■■□□ 2.41
TRIM49BA6NDI0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM49BA6NDI0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM49BA6NDI0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.11■■■□□ 2.41
TRIM49BA6NDI0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms