Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV10-1A0A0K0K1A3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV10-1A0A0K0K1A3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV10-1A0A0K0K1A3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV10-1A0A0K0K1A3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV10-1A0A0K0K1A3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRBV10-1A0A0K0K1A3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV10-1A0A0K0K1A3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBV10-1A0A0K0K1A3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV10-1A0A0K0K1A3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV10-1A0A0K0K1A3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV10-1A0A0K0K1A3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
TRBV10-1A0A0K0K1A3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBV10-1A0A0K0K1A3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV10-1A0A0K0K1A3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV10-1A0A0K0K1A3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBV10-1A0A0K0K1A3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV10-1A0A0K0K1A3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV10-1A0A0K0K1A3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV10-1A0A0K0K1A3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV10-1A0A0K0K1A3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRBV10-1A0A0K0K1A3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV10-1A0A0K0K1A3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV10-1A0A0K0K1A3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.51■□□□□ 0.71
TRBV10-1A0A0K0K1A3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV10-1A0A0K0K1A3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV10-1A0A0K0K1A3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV10-1A0A0K0K1A3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV10-1A0A0K0K1A3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.48■□□□□ 0.71
TRBV10-1A0A0K0K1A3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV10-1A0A0K0K1A3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV10-1A0A0K0K1A3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV10-1A0A0K0K1A3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV10-1A0A0K0K1A3 AC120057.4-201ENST00000624722 1615 ntBASIC19.47■□□□□ 0.71
TRBV10-1A0A0K0K1A3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.46■□□□□ 0.71
TRBV10-1A0A0K0K1A3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV10-1A0A0K0K1A3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV10-1A0A0K0K1A3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV10-1A0A0K0K1A3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV10-1A0A0K0K1A3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV10-1A0A0K0K1A3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV10-1A0A0K0K1A3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV10-1A0A0K0K1A3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV10-1A0A0K0K1A3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV10-1A0A0K0K1A3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV10-1A0A0K0K1A3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
TRBV10-1A0A0K0K1A3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV10-1A0A0K0K1A3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV10-1A0A0K0K1A3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV10-1A0A0K0K1A3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV10-1A0A0K0K1A3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV10-1A0A0K0K1A3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV10-1A0A0K0K1A3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV10-1A0A0K0K1A3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV10-1A0A0K0K1A3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV10-1A0A0K0K1A3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV10-1A0A0K0K1A3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV10-1A0A0K0K1A3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV10-1A0A0K0K1A3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV10-1A0A0K0K1A3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV10-1A0A0K0K1A3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV10-1A0A0K0K1A3 DYNLL1-208ENST00000550178 581 ntBASIC19.34■□□□□ 0.69
TRBV10-1A0A0K0K1A3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV10-1A0A0K0K1A3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV10-1A0A0K0K1A3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV10-1A0A0K0K1A3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV10-1A0A0K0K1A3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV10-1A0A0K0K1A3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV10-1A0A0K0K1A3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV10-1A0A0K0K1A3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV10-1A0A0K0K1A3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV10-1A0A0K0K1A3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV10-1A0A0K0K1A3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV10-1A0A0K0K1A3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV10-1A0A0K0K1A3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV10-1A0A0K0K1A3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV10-1A0A0K0K1A3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRBV10-1A0A0K0K1A3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV10-1A0A0K0K1A3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV10-1A0A0K0K1A3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV10-1A0A0K0K1A3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV10-1A0A0K0K1A3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV10-1A0A0K0K1A3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV10-1A0A0K0K1A3 AL031258.1-201ENST00000623562 325 ntBASIC19.21■□□□□ 0.67
TRBV10-1A0A0K0K1A3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV10-1A0A0K0K1A3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV10-1A0A0K0K1A3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV10-1A0A0K0K1A3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV10-1A0A0K0K1A3 AP002365.1-201ENST00000603448 772 ntBASIC19.19■□□□□ 0.66
TRBV10-1A0A0K0K1A3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV10-1A0A0K0K1A3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV10-1A0A0K0K1A3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV10-1A0A0K0K1A3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRBV10-1A0A0K0K1A3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV10-1A0A0K0K1A3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV10-1A0A0K0K1A3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV10-1A0A0K0K1A3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TRBV10-1A0A0K0K1A3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV10-1A0A0K0K1A3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV10-1A0A0K0K1A3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms