Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV13-1A0A0B4J241 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRAV13-1A0A0B4J241 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV13-1A0A0B4J241 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV13-1A0A0B4J241 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV13-1A0A0B4J241 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV13-1A0A0B4J241 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV13-1A0A0B4J241 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV13-1A0A0B4J241 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV13-1A0A0B4J241 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV13-1A0A0B4J241 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV13-1A0A0B4J241 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV13-1A0A0B4J241 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV13-1A0A0B4J241 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV13-1A0A0B4J241 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV13-1A0A0B4J241 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV13-1A0A0B4J241 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV13-1A0A0B4J241 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV13-1A0A0B4J241 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV13-1A0A0B4J241 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV13-1A0A0B4J241 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV13-1A0A0B4J241 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV13-1A0A0B4J241 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV13-1A0A0B4J241 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV13-1A0A0B4J241 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV13-1A0A0B4J241 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV13-1A0A0B4J241 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV13-1A0A0B4J241 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV13-1A0A0B4J241 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV13-1A0A0B4J241 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV13-1A0A0B4J241 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV13-1A0A0B4J241 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV13-1A0A0B4J241 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV13-1A0A0B4J241 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV13-1A0A0B4J241 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV13-1A0A0B4J241 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV13-1A0A0B4J241 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV13-1A0A0B4J241 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV13-1A0A0B4J241 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV13-1A0A0B4J241 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV13-1A0A0B4J241 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV13-1A0A0B4J241 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRAV13-1A0A0B4J241 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19■□□□□ 0.63
TRAV13-1A0A0B4J241 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV13-1A0A0B4J241 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV13-1A0A0B4J241 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.99■□□□□ 0.63
TRAV13-1A0A0B4J241 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV13-1A0A0B4J241 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV13-1A0A0B4J241 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV13-1A0A0B4J241 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV13-1A0A0B4J241 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV13-1A0A0B4J241 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV13-1A0A0B4J241 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV13-1A0A0B4J241 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV13-1A0A0B4J241 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV13-1A0A0B4J241 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV13-1A0A0B4J241 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV13-1A0A0B4J241 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV13-1A0A0B4J241 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV13-1A0A0B4J241 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV13-1A0A0B4J241 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV13-1A0A0B4J241 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV13-1A0A0B4J241 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV13-1A0A0B4J241 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV13-1A0A0B4J241 AC120057.4-201ENST00000624722 1615 ntBASIC18.89■□□□□ 0.61
TRAV13-1A0A0B4J241 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV13-1A0A0B4J241 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV13-1A0A0B4J241 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV13-1A0A0B4J241 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV13-1A0A0B4J241 ABCB10P1-201ENST00000614297 2181 ntBASIC18.86■□□□□ 0.61
TRAV13-1A0A0B4J241 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV13-1A0A0B4J241 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV13-1A0A0B4J241 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV13-1A0A0B4J241 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV13-1A0A0B4J241 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV13-1A0A0B4J241 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV13-1A0A0B4J241 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV13-1A0A0B4J241 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV13-1A0A0B4J241 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV13-1A0A0B4J241 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV13-1A0A0B4J241 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV13-1A0A0B4J241 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV13-1A0A0B4J241 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV13-1A0A0B4J241 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV13-1A0A0B4J241 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV13-1A0A0B4J241 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV13-1A0A0B4J241 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV13-1A0A0B4J241 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV13-1A0A0B4J241 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAV13-1A0A0B4J241 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV13-1A0A0B4J241 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV13-1A0A0B4J241 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV13-1A0A0B4J241 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
TRAV13-1A0A0B4J241 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV13-1A0A0B4J241 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV13-1A0A0B4J241 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV13-1A0A0B4J241 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV13-1A0A0B4J241 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV13-1A0A0B4J241 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV13-1A0A0B4J241 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms