Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BIVM-ERCC5R4GMW8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC22.21■■□□□ 1.15
BIVM-ERCC5R4GMW8 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BIVM-ERCC5R4GMW8 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 AC010997.1-201ENST00000447646 350 ntBASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 ALOX12P1-201ENST00000579299 1229 ntBASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 AC112220.4-201ENST00000604982 1263 ntBASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
BIVM-ERCC5R4GMW8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC073869.1-201ENST00000415574 2762 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 CLK2P1-201ENST00000416636 1294 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 RPS15P5-201ENST00000449885 432 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC104117.4-201ENST00000521486 847 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 OR3A1-202ENST00000615105 966 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 BCL2-203ENST00000589955 5011 ntBASIC22.2■■□□□ 1.14
BIVM-ERCC5R4GMW8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 FAM90A12P-201ENST00000519497 2375 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 FAM90A24P-201ENST00000520792 2369 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 SLC25A15P1-201ENST00000456738 342 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 RN7SL677P-201ENST00000466970 319 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 AL109983.1-201ENST00000603234 646 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC073488.1-201ENST00000416620 1600 ntBASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BIVM-ERCC5R4GMW8 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 HMGA1P2-201ENST00000430198 324 ntBASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 AKR1C6P-201ENST00000432950 983 ntBASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 RN7SL678P-201ENST00000579533 299 ntBASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 MIR6125-201ENST00000618986 96 ntBASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BIVM-ERCC5R4GMW8 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 TPI1P3-201ENST00000335020 740 ntBASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 PTPA-219ENST00000435305 530 ntTSL 2 BASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 Z84721.1-201ENST00000438841 372 ntBASIC22.17■■□□□ 1.14
BIVM-ERCC5R4GMW8 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms