Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AC113347.2-201ENST00000512350 279 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 RN7SL524P-201ENST00000581152 300 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 OR7E155P-201ENST00000412208 1014 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 KRT8P38-201ENST00000441370 1430 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AC007279.1-201ENST00000448547 837 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 HNRNPA1P42-201ENST00000458678 957 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 RN7SL602P-201ENST00000578326 324 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 RN7SL718P-201ENST00000581254 303 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 AC016582.2-202ENST00000587765 1094 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 NEK4P3-201ENST00000604859 544 ntBASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRMT13Q9NUP7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRMT13Q9NUP7 AC040160.2-201ENST00000623816 1675 ntBASIC15.12■□□□□ 0.01
TRMT13Q9NUP7 MYO15B-237ENST00000642007 4893 ntBASIC15.12■□□□□ 0.01
TRMT13Q9NUP7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRMT13Q9NUP7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms