Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREX2Q9BQ50 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TREX2Q9BQ50 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TREX2Q9BQ50 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 AL359845.1-201ENST00000458202 1648 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 XBP1P1-201ENST00000436573 652 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 AL596276.2-201ENST00000447525 331 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 MARK2P5-201ENST00000507649 634 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 SCARNA21-201ENST00000517026 139 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 AP000346.4-201ENST00000614827 381 ntBASIC13.21□□□□□ -0.29
TREX2Q9BQ50 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TREX2Q9BQ50 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TREX2Q9BQ50 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 AC006480.2-201ENST00000609770 1337 ntBASIC13.2□□□□□ -0.3
TREX2Q9BQ50 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.2□□□□□ -0.3
TREX2Q9BQ50 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms