Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AL365209.1-201ENST00000624418 6473 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC007326.2-201ENST00000624224 7579 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SHKBP1Q8TBC3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 EEF1GP8-201ENST00000506566 1154 ntBASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AC010976.2-201ENST00000609697 852 ntBASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 AL590824.1-201ENST00000403828 1349 ntBASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.64□□□□□ -0.07
SHKBP1Q8TBC3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 FUCA1P1-201ENST00000374476 1351 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 OR7E115P-201ENST00000382617 1024 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC025186.1-201ENST00000478174 870 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC010234.1-201ENST00000494599 870 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 AC132825.4-202ENST00000578792 434 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 TRMT112P3-201ENST00000580149 358 ntBASIC14.63□□□□□ -0.07
SHKBP1Q8TBC3 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms