Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 Z98885.3-201ENST00000624882 1757 ntBASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 AC092053.3-201ENST00000641308 4975 ntBASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 LINC01815-202ENST00000641468 1409 ntBASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN22Q8N7P3 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CLDN22Q8N7P3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 MTX1P1-201ENST00000440904 838 ntBASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AP005482.1-201ENST00000563722 1273 ntBASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AC008805.1-201ENST00000590892 364 ntBASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 AL096828.3-201ENST00000615354 462 ntBASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PCDHA6-201ENST00000378126 3267 ntBASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN22Q8N7P3 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 PI4KAP2-201ENST00000360806 2080 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms