Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 TCAM1P-207ENST00000485295 1537 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 BAK1P1-201ENST00000317045 636 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AC092573.1-201ENST00000433054 884 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AC012362.1-201ENST00000434906 739 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 AL359091.4-201ENST00000610052 409 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AC068760.1-201ENST00000493579 1953 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AL357563.1-201ENST00000404728 395 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AC004837.1-201ENST00000446267 564 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 IGHV1-12-201ENST00000518307 205 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AL009176.1-201ENST00000607876 650 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 BAP1-211ENST00000615113 489 ntBASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3CQ6NXT2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms