Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC073089.1-201ENST00000457546 214 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC024909.3-201ENST00000611513 2257 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 AC092135.3-201ENST00000624151 1846 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 KRT8P43-201ENST00000406052 1458 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 OR7E122P-201ENST00000383606 1017 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 ACTBP1-201ENST00000417985 1113 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 RN7SL2-201ENST00000490232 300 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 RN7SL4P-201ENST00000584058 295 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 RPL21P135-201ENST00000442539 791 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 GH2-205ENST00000622506 702 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 NORAD-201ENST00000565493 5339 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 AC092850.2-201ENST00000623821 2697 ntBASIC12.72□□□□□ -0.37
CACNA1BQ00975 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CACNA1BQ00975 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC12.72□□□□□ -0.37
CACNA1BQ00975 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 LINC00115-201ENST00000473798 1317 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 AQP7-207ENST00000447660 998 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 AC016304.1-201ENST00000476363 413 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms