Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 COX11-210ENST00000639671 696 ntBASIC15□□□□□ -0.01
SSR1P43307 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSR1P43307 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC15□□□□□ -0.01
SSR1P43307 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSR1P43307 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSR1P43307 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15□□□□□ -0.01
SSR1P43307 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SSR1P43307 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
SSR1P43307 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.99□□□□□ -0.01
SSR1P43307 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SSR1P43307 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.99□□□□□ -0.01
SSR1P43307 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SSR1P43307 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.99□□□□□ -0.01
SSR1P43307 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 HMGA1P1-201ENST00000415560 1062 ntBASIC14.99□□□□□ -0.01
SSR1P43307 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.99□□□□□ -0.01
SSR1P43307 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.99□□□□□ -0.01
SSR1P43307 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 SCARNA21-201ENST00000517026 139 ntBASIC14.99□□□□□ -0.01
SSR1P43307 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 DUX4L45-201ENST00000566406 1057 ntBASIC14.99□□□□□ -0.01
SSR1P43307 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
SSR1P43307 AC092299.1-201ENST00000632679 757 ntBASIC14.99□□□□□ -0.01
SSR1P43307 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SSR1P43307 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SSR1P43307 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSR1P43307 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms