Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC00265-2P-201ENST00000413372 782 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 PPP1R2P4-201ENST00000424051 595 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 RN7SL8P-201ENST00000461771 266 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CNOT4O95628 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.53□□□□□ -0.4
CNOT4O95628 AC103810.10-201ENST00000606504 343 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 AL805961.1-201ENST00000642026 753 ntBASIC12.53□□□□□ -0.4
CNOT4O95628 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CNOT4O95628 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CNOT4O95628 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.53□□□□□ -0.4
CNOT4O95628 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CNOT4O95628 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CNOT4O95628 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CNOT4O95628 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.52□□□□□ -0.4
CNOT4O95628 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CNOT4O95628 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
CNOT4O95628 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CNOT4O95628 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.52□□□□□ -0.4
CNOT4O95628 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AL139385.1-201ENST00000611744 3272 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 CR383656.2-201ENST00000548656 2254 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CNOT4O95628 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AL627231.1-201ENST00000394467 1125 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 AC073869.2-201ENST00000417338 1026 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 NPM1P43-201ENST00000558669 786 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.52□□□□□ -0.41
CNOT4O95628 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 NDUFB10P1-201ENST00000567319 521 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.52□□□□□ -0.41
CNOT4O95628 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.52□□□□□ -0.41
CNOT4O95628 SIGLEC18P-201ENST00000602271 909 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.52□□□□□ -0.41
CNOT4O95628 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AL928921.2-201ENST00000641325 2442 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
CNOT4O95628 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 Z82170.1-201ENST00000625081 3192 ntBASIC12.52□□□□□ -0.41
CNOT4O95628 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.52□□□□□ -0.41
CNOT4O95628 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.52□□□□□ -0.41
CNOT4O95628 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CNOT4O95628 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CNOT4O95628 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CNOT4O95628 AC090114.2-201ENST00000608477 7054 ntBASIC12.51□□□□□ -0.41
CNOT4O95628 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms