Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.86□□□□□ -0.35
NKX2-2O95096 AC091812.3-201ENST00000621362 345 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.86□□□□□ -0.35
NKX2-2O95096 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 AC006372.4-201ENST00000624122 1543 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PDXDC2P-206ENST00000534700 1315 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 MKRN5P-201ENST00000445263 1467 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 MIR1307-201ENST00000408840 149 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 AC007274.2-201ENST00000421675 662 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX2-2O95096 SCARNA12-201ENST00000459155 270 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX2-2O95096 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX2-2O95096 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX2-2O95096 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.85□□□□□ -0.35
NKX2-2O95096 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 AC131212.3-201ENST00000624087 4219 ntBASIC12.85□□□□□ -0.35
NKX2-2O95096 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.85□□□□□ -0.35
NKX2-2O95096 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.85□□□□□ -0.35
NKX2-2O95096 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NKX2-2O95096 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-2O95096 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AL662890.1-201ENST00000396818 632 ntBASIC12.84□□□□□ -0.35
NKX2-2O95096 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AC092573.1-201ENST00000433054 884 ntBASIC12.84□□□□□ -0.35
NKX2-2O95096 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.84□□□□□ -0.35
NKX2-2O95096 AC018638.5-201ENST00000450885 754 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms