Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC010141.1-201ENST00000411585 623 ntBASIC14.97□□□□□ -0.01
CTAGE9A4FU28 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 TERF1P3-201ENST00000505638 1227 ntBASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC190387.1-201ENST00000551683 408 ntBASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 WASH4P-201ENST00000564273 1246 ntBASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AC124068.2-201ENST00000569473 1109 ntBASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.97□□□□□ -0.01
CTAGE9A4FU28 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 SHC1P1-201ENST00000425230 1745 ntBASIC14.96□□□□□ -0.01
CTAGE9A4FU28 AL645933.1-201ENST00000440087 609 ntBASIC14.96□□□□□ -0.01
CTAGE9A4FU28 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 AC022497.1-201ENST00000624916 3691 ntBASIC14.96□□□□□ -0.01
CTAGE9A4FU28 AL033527.5-201ENST00000641382 801 ntBASIC14.96□□□□□ -0.01
CTAGE9A4FU28 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTAGE9A4FU28 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CTAGE9A4FU28 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTAGE9A4FU28 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CTAGE9A4FU28 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.96□□□□□ -0.02
CTAGE9A4FU28 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTAGE9A4FU28 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTAGE9A4FU28 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms