Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPO2Q9UMS6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC104961.1-201ENST00000427605 771 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC010086.2-201ENST00000428616 226 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 PGK1P2-201ENST00000431702 1214 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 ZNF877P-201ENST00000437614 612 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC083801.1-201ENST00000491689 358 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 SRPK2P-201ENST00000523408 1100 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 PIGCP1-201ENST00000527583 895 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 Z82244.1-201ENST00000631502 840 ntBASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPO2Q9UMS6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 AC064850.1-201ENST00000413279 1398 ntBASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 AL359845.1-201ENST00000458202 1648 ntBASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SYNPO2Q9UMS6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AC072061.1-201ENST00000569710 2234 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms