Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AL365181.3-201ENST00000605886 3222 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 ACE3P-201ENST00000423435 1973 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 KRT8P42-201ENST00000405771 1399 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC023157.1-201ENST00000453713 402 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 CTBP2P7-201ENST00000593270 1244 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 UBR1-212ENST00000627960 189 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AL031587.5-201ENST00000624344 1849 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC126365.1-201ENST00000578585 1514 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 HNRNPA1P34-201ENST00000391992 950 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC067942.1-202ENST00000471756 1057 ntBASIC12.56□□□□□ -0.4
CHD8Q9HCK8 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHD8Q9HCK8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SNORA80B-201ENST00000383906 136 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 RN7SL483P-201ENST00000478417 285 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AL356423.1-201ENST00000604953 538 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC010601.2-201ENST00000623060 774 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms