Protein–RNA interactions for Protein: Q9BZR9

TRIM8, Probable E3 ubiquitin-protein ligase TRIM8, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8Q9BZR9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 MIR4722-201ENST00000578292 60 ntBASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 AC118758.2-201ENST00000614242 2813 ntBASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM8Q9BZR9 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC009093.10-201ENST00000641956 1442 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC073957.3-201ENST00000609998 6758 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 EIF4HP1-201ENST00000453115 687 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 BX284668.4-201ENST00000453917 508 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AP006547.1-201ENST00000563435 692 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 RN7SL48P-201ENST00000579283 293 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 AC002472.3-201ENST00000640124 621 ntBASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM8Q9BZR9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRIM8Q9BZR9 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRIM8Q9BZR9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 FNTAP2-201ENST00000430308 634 ntBASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 MIR4706-201ENST00000582134 82 ntBASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM8Q9BZR9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms