Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
AP3S1Q92572 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
AP3S1Q92572 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 Z98885.3-201ENST00000624882 1757 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 RN7SKP175-201ENST00000408472 289 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S1Q92572 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S1Q92572 AL589987.1-201ENST00000453380 819 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S1Q92572 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.34□□□□□ -0.43
AP3S1Q92572 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S1Q92572 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S1Q92572 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 BX640515.1-201ENST00000617215 977 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 IL9RP3-201ENST00000442856 1674 ntBASIC12.34□□□□□ -0.43
AP3S1Q92572 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
AP3S1Q92572 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S1Q92572 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
AP3S1Q92572 AC007614.5-201ENST00000623424 8892 ntBASIC12.33□□□□□ -0.43
AP3S1Q92572 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.33□□□□□ -0.43
AP3S1Q92572 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.33□□□□□ -0.43
AP3S1Q92572 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.33□□□□□ -0.43
AP3S1Q92572 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S1Q92572 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.33□□□□□ -0.43
AP3S1Q92572 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.33□□□□□ -0.43
AP3S1Q92572 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S1Q92572 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S1Q92572 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP3S1Q92572 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S1Q92572 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
AP3S1Q92572 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 AC092123.2-201ENST00000611189 5421 ntBASIC12.33□□□□□ -0.44
AP3S1Q92572 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S1Q92572 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP3S1Q92572 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
AP3S1Q92572 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S1Q92572 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms