Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AL161772.1-201ENST00000610494 4412 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC083964.2-201ENST00000623988 2396 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC016397.2-201ENST00000624848 1985 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 RPL3P2-204ENST00000413027 1203 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 HMGA1P1-201ENST00000415560 1062 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AQP7P5-201ENST00000428759 1049 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 PSMD4P1-201ENST00000433951 1109 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AQP7P4-201ENST00000447083 1042 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AQP7P2-201ENST00000453967 1041 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 STK24P1-201ENST00000455035 1291 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC024293.1-201ENST00000467930 498 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 PRSS3P1-201ENST00000503996 742 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 VENTXP3-201ENST00000546480 773 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AL009176.1-201ENST00000607876 650 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AQP7P3-201ENST00000624547 1041 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AC002472.4-201ENST00000641915 272 ntBASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.66□□□□□ -0.06
SHKBP1Q8TBC3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PCDHA3-202ENST00000532566 4594 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 USP17L6P-201ENST00000382470 1197 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 MIR1227-201ENST00000408484 88 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC006529.1-201ENST00000459978 637 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC005357.2-202ENST00000590507 1060 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 AC012073.1-201ENST00000606114 1108 ntBASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHKBP1Q8TBC3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms