Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 AC092658.1-201ENST00000505836 891 ntBASIC13.11□□□□□ -0.31
NUP43Q8NFH3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 AC079336.7-201ENST00000623428 1078 ntBASIC13.11□□□□□ -0.31
NUP43Q8NFH3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 MARK2P16-201ENST00000605714 1723 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 LINC00638-201ENST00000555578 2518 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 AL445250.1-201ENST00000641671 2259 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 AL358781.1-202ENST00000321081 1360 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 AC244452.3-201ENST00000636814 210 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 KRT8P43-201ENST00000406052 1458 ntBASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NUP43Q8NFH3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NUP43Q8NFH3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms