Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AP006547.1-201ENST00000563435 692 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 PPY2P-201ENST00000582808 702 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 RN7SL219P-201ENST00000582872 296 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AC073413.1-201ENST00000603927 732 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 FAM86MP-201ENST00000340703 885 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AP003171.2-201ENST00000528208 925 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AC138696.2-201ENST00000607376 223 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 AC244157.2-201ENST00000616239 1006 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 AP003969.2-201ENST00000623739 2275 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRRC28Q86X40 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.53□□□□□ -0.4
LRRC28Q86X40 KRT8P4-201ENST00000509735 1454 ntBASIC12.53□□□□□ -0.4
LRRC28Q86X40 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms