Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MIR3907-201ENST00000579424 151 ntBASIC13.32□□□□□ -0.28
SKP1P63208 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 AC087392.5-201ENST00000612517 489 ntBASIC13.32□□□□□ -0.28
SKP1P63208 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SKP1P63208 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SKP1P63208 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.32□□□□□ -0.28
SKP1P63208 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SKP1P63208 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 AC041040.2-201ENST00000622926 2899 ntBASIC13.31□□□□□ -0.28
SKP1P63208 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 KRT8P19-201ENST00000551916 1455 ntBASIC13.31□□□□□ -0.28
SKP1P63208 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.31□□□□□ -0.28
SKP1P63208 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 TMEM198B-204ENST00000484016 896 ntBASIC13.31□□□□□ -0.28
SKP1P63208 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 AP005264.5-201ENST00000590066 467 ntBASIC13.31□□□□□ -0.28
SKP1P63208 AF254983.2-201ENST00000612331 135 ntBASIC13.31□□□□□ -0.28
SKP1P63208 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.31□□□□□ -0.28
SKP1P63208 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.31□□□□□ -0.28
SKP1P63208 BEND3P1-201ENST00000421591 1944 ntBASIC13.31□□□□□ -0.28
SKP1P63208 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SKP1P63208 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.31□□□□□ -0.28
SKP1P63208 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.3□□□□□ -0.28
SKP1P63208 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 KRT8P43-201ENST00000406052 1458 ntBASIC13.3□□□□□ -0.28
SKP1P63208 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms