Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC233724.9-201ENST00000511694 407 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6BP35913 ABCC6P1-203ENST00000565566 1170 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6BP35913 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.98■□□□□ 0.31
PDE6BP35913 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 HSD3BP1-201ENST00000286193 1111 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PDE6BP35913 SNORD88B-201ENST00000408454 91 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 SNORA47-201ENST00000458862 138 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 RPL29P2-202ENST00000498671 657 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 AP003040.1-201ENST00000532044 1024 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.97■□□□□ 0.31
PDE6BP35913 MIR3940-201ENST00000579148 102 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 CCND3P2-201ENST00000579393 537 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.97■□□□□ 0.31
PDE6BP35913 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PDE6BP35913 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
PDE6BP35913 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 AC061965.1-201ENST00000560524 1465 ntBASIC16.97■□□□□ 0.31
PDE6BP35913 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.97■□□□□ 0.31
PDE6BP35913 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6BP35913 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6BP35913 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PDE6BP35913 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 AC245140.2-201ENST00000624054 1939 ntBASIC16.96■□□□□ 0.31
PDE6BP35913 AC089987.1-201ENST00000551654 2209 ntBASIC16.96■□□□□ 0.31
PDE6BP35913 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms