Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.11□□□□□ -0.15
RETP07949 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.11□□□□□ -0.15
RETP07949 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RETP07949 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.11□□□□□ -0.15
RETP07949 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.1□□□□□ -0.15
RETP07949 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.1□□□□□ -0.15
RETP07949 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.1□□□□□ -0.15
RETP07949 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RETP07949 OR7E115P-201ENST00000382617 1024 ntBASIC14.1□□□□□ -0.15
RETP07949 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RETP07949 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.1□□□□□ -0.15
RETP07949 AC092570.1-201ENST00000414446 469 ntBASIC14.1□□□□□ -0.15
RETP07949 AL512599.1-201ENST00000430724 685 ntBASIC14.1□□□□□ -0.15
RETP07949 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.1□□□□□ -0.15
RETP07949 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.1□□□□□ -0.15
RETP07949 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.1□□□□□ -0.15
RETP07949 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.1□□□□□ -0.15
RETP07949 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.1□□□□□ -0.15
RETP07949 AC090386.2-201ENST00000623010 1039 ntBASIC14.1□□□□□ -0.15
RETP07949 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.1□□□□□ -0.15
RETP07949 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RETP07949 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RETP07949 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RETP07949 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.1□□□□□ -0.15
RETP07949 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RETP07949 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
RETP07949 CR383656.2-201ENST00000548656 2254 ntBASIC14.1□□□□□ -0.15
RETP07949 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RETP07949 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RETP07949 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.09□□□□□ -0.15
RETP07949 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.09□□□□□ -0.15
RETP07949 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.09□□□□□ -0.15
RETP07949 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.09□□□□□ -0.15
RETP07949 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.09□□□□□ -0.15
RETP07949 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 BCRP4-201ENST00000506079 804 ntBASIC14.09□□□□□ -0.15
RETP07949 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.09□□□□□ -0.15
RETP07949 URB1-AS1-201ENST00000534991 831 ntBASIC14.09□□□□□ -0.15
RETP07949 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.09□□□□□ -0.15
RETP07949 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.09□□□□□ -0.15
RETP07949 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.09□□□□□ -0.15
RETP07949 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 AC020910.6-201ENST00000623084 1459 ntBASIC14.09□□□□□ -0.15
RETP07949 AC139712.1-201ENST00000378256 1875 ntBASIC14.09□□□□□ -0.15
RETP07949 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RETP07949 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RETP07949 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RETP07949 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.09□□□□□ -0.15
RETP07949 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.09□□□□□ -0.15
RETP07949 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.09□□□□□ -0.15
RETP07949 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RETP07949 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RETP07949 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
RETP07949 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms