Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.84■□□□□ 0.29
APPP05067 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.84■□□□□ 0.29
APPP05067 AL627422.1-201ENST00000434104 580 ntBASIC16.84■□□□□ 0.29
APPP05067 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.84■□□□□ 0.29
APPP05067 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
APPP05067 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.84■□□□□ 0.29
APPP05067 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.84■□□□□ 0.29
APPP05067 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.84■□□□□ 0.29
APPP05067 AC084346.2-201ENST00000607097 949 ntBASIC16.84■□□□□ 0.29
APPP05067 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.84■□□□□ 0.29
APPP05067 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
APPP05067 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 AC006372.4-201ENST00000624122 1543 ntBASIC16.84■□□□□ 0.29
APPP05067 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
APPP05067 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
APPP05067 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.84■□□□□ 0.29
APPP05067 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.84■□□□□ 0.29
APPP05067 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.84■□□□□ 0.29
APPP05067 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
APPP05067 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.84■□□□□ 0.29
APPP05067 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
APPP05067 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
APPP05067 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
APPP05067 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
APPP05067 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.83■□□□□ 0.28
APPP05067 KRT8P43-201ENST00000406052 1458 ntBASIC16.83■□□□□ 0.28
APPP05067 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
APPP05067 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.83■□□□□ 0.28
APPP05067 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.83■□□□□ 0.28
APPP05067 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
APPP05067 KLF17P1-201ENST00000547105 1126 ntBASIC16.83■□□□□ 0.28
APPP05067 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.83■□□□□ 0.28
APPP05067 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.83■□□□□ 0.28
APPP05067 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.83■□□□□ 0.28
APPP05067 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.83■□□□□ 0.28
APPP05067 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
APPP05067 RN7SL665P-201ENST00000578793 300 ntBASIC16.83■□□□□ 0.28
APPP05067 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
APPP05067 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.83■□□□□ 0.28
APPP05067 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.83■□□□□ 0.28
APPP05067 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APPP05067 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.83■□□□□ 0.28
APPP05067 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.82■□□□□ 0.28
APPP05067 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.82■□□□□ 0.28
APPP05067 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
APPP05067 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APPP05067 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.82■□□□□ 0.28
APPP05067 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APPP05067 AC026316.1-201ENST00000398900 414 ntBASIC16.82■□□□□ 0.28
APPP05067 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.82■□□□□ 0.28
APPP05067 NDUFS6P1-201ENST00000485187 316 ntBASIC16.82■□□□□ 0.28
APPP05067 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.82■□□□□ 0.28
APPP05067 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.82■□□□□ 0.28
APPP05067 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.82■□□□□ 0.28
APPP05067 AC095040.1-201ENST00000513286 675 ntBASIC16.82■□□□□ 0.28
APPP05067 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.82■□□□□ 0.28
APPP05067 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms